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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_00434
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  57/199 : Viruses  0/175   --->[See Alignment]
a.17.1
:168 amino acids
:SECSTR
:PSIPRED
:RPS:PDB   129->163 1ei0A PDBj 3e-06 22.9 %
:RPS:SCOP  126->163 1hp8A  a.17.1.1 * 3e-07 21.1 %
:HMM:PFM   18->130 PF09849 * DUF2076 7.8e-10 23.1 91/247  
:HMM:PFM   130->163 PF06747 * CHCH 1.4e-08 23.5 34/35  
:BLT:SWISS 118->168 MIC17_YEAST 8e-12 54.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_00434 GT:GENE CIRG_00434 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 168 SQ:AASEQ MARQRRGAAPTPARRAPARPTPAPAAPAQTQHRASSTAAAPPPAAPAAQQAAPPQAVQQSQGPGLFAQMASTAAGVAVGSSIGHAVGSFFTGGSSSAPAEAAQAPPASSAPMDNSLYQSNSSSWGQSQACETDVKAFRTCMDEHSGNMSICGWYLDQLKACQEAAKQY BL:SWS:NREP 1 BL:SWS:REP 118->168|MIC17_YEAST|8e-12|54.9|51/156| SEG 2->61|arqrrgaaptparraparptpapaapaqtqhrasstaaapppaapaaqqaappqavqqsq| SEG 70->88|astaagvavgssighavgs| SEG 94->111|sssapaeaaqappassap| RP:PDB:NREP 1 RP:PDB:REP 129->163|1ei0A|3e-06|22.9|35/38| HM:PFM:NREP 2 HM:PFM:REP 18->130|PF09849|7.8e-10|23.1|91/247|DUF2076| HM:PFM:REP 130->163|PF06747|1.4e-08|23.5|34/35|CHCH| RP:SCP:NREP 1 RP:SCP:REP 126->163|1hp8A|3e-07|21.1|38/68|a.17.1.1| OP:NHOMO 57 OP:NHOMOORG 57 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------111111111111111111111-11111111111---1-111-111111---1--111-1-111111---11------1------------------------------------------------------------------------------------------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 35 STR:RPRED 20.8 SQ:SECSTR ################################################################################################################################ccHHHHHHHHHHHHHTTTcGGGTHHHHHHHHHHHH##### PSIPRED ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEHHHHHHHHHHHHHHHccc //