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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_00701
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  77/199 : Viruses  0/175   --->[See Alignment]
:392 amino acids
:PSIPRED
:RPS:PFM   2->382 PF05625 * PAXNEB 8e-50 46.2 %
:HMM:PFM   1->392 PF05625 * PAXNEB 2.2e-126 48.0 348/363  
:BLT:SWISS 71->375 ELP4_SCHPO 5e-34 34.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_00701 GT:GENE CIRG_00701 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 392 SQ:AASEQ MSFRKRNIGLSTGTQRTAGPHGPTKDVAQHPVLGLRPSPVDGRQTTSTGTPTLDNLLAGHAGLALGSSLLVEESGTTDFAGALLRYYAAEGIVQEHQLHVVGFDPQWAATLPGLVGAAEAADEKPREKGEKMKIAWRYEKLGDFGAGITPSRAPTAVADKSDPSAAPQAVPAVFCHAFDLTKRLTHPGMSSVNFIPLSPPTLQSSPLASVGQRLSQAISSSPPHTIHRVIIPSLLSPALYPPQASKPECVLQFLHSIRALLSTHSNRMTVMITLPLSLYPRSSGLVRWIELLTDGVIELAPFPHSAHSNPSTTSGAATAQEEPPQGMLKIHRLPVFHERGGGGDKNMGEDWAFTFSRRKFTIKPFSLPPVDGDNEAQQGAPSSGKSKADLEF BL:SWS:NREP 1 BL:SWS:REP 71->375|ELP4_SCHPO|5e-34|34.4|276/361| SEG 56->70|llaghaglalgssll| SEG 196->209|plspptlqssplas| RP:PFM:NREP 1 RP:PFM:REP 2->382|PF05625|8e-50|46.2|327/342|PAXNEB| HM:PFM:NREP 1 HM:PFM:REP 1->392|PF05625|2.2e-126|48.0|348/363|PAXNEB| GO:PFM:NREP 2 GO:PFM GO:0006357|"GO:regulation of transcription from RNA polymerase II promoter"|PF05625|IPR008728| GO:PFM GO:0033588|"GO:Elongator holoenzyme complex"|PF05625|IPR008728| OP:NHOMO 78 OP:NHOMOORG 77 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------111111111111111111111111111111111111111111-1111111111111111111-1111111111----1----------111------1----------------------------------------------------------------------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PSIPRED cccEEccccccccccccccccccccccccccccccccccccccEEEEccccHHHHHHccccccccccEEEEEEcccccHHHHHHHHHHHHHHHcccEEEEEEccccHHHHcccccccccccccccccccccEEEEEEEHHccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccHHHcccHHHHHHHHHHHHHHccccccEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHcccccEEEEEEEcHHHccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHccccccccccccEEEEEEccccccccccccccccccEEEEEEccEEEEEEEccccccccccccccccccccHHccccc //