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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_00710
DDBJ      :             
Swiss-Prot:DBP7_COCIM   RecName: Full=ATP-dependent RNA helicase DBP7;         EC=3.6.1.-;

Homologs  Archaea  42/68 : Bacteria  823/915 : Eukaryota  198/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:761 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   154->585 3i5xA PDBj 7e-36 34.4 %
:RPS:PDB   152->580 1cu1A PDBj 6e-42 11.1 %
:RPS:SCOP  154->390 1fuuA  c.37.1.19 * 1e-32 29.1 %
:RPS:SCOP  320->587 2fwrA1  c.37.1.19 * 5e-20 16.0 %
:HMM:SCOP  135->392 1wrbA1 c.37.1.19 * 6.6e-51 37.4 %
:HMM:SCOP  316->593 2fwrA1 c.37.1.19 * 1.1e-32 34.5 %
:RPS:PFM   182->371 PF00270 * DEAD 3e-28 49.7 %
:RPS:PFM   509->574 PF00271 * Helicase_C 3e-12 44.6 %
:HMM:PFM   180->378 PF00270 * DEAD 2.4e-43 40.1 167/167  
:HMM:PFM   508->576 PF00271 * Helicase_C 3.7e-21 44.1 68/78  
:BLT:SWISS 1->761 DBP7_COCIM 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_00710 GT:GENE CIRG_00710 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 761 SQ:AASEQ MAEDGMLLNFSLDDSVIKPQQRFKGGTWKDRLVAKKIAVKRQNKSRHSAETGAVNSNNPQNPNKINVPTGQRPAKRQRIDGGDFKPTTKSSAGGGGVGNDEQTDRKSYGDRQVISSLFTYNPTAKTVASTDGATHDEDTTEPAKPSNAPLVDGIDTFTSLGLSPSLATHLLTKLNLKTPTAIQKSSITQLLKEECDAFVQAQTGSGKTLAYLLPIVERLMRISSHNKGKKDSEGNTVHRDSGLFAIVLAPTRELCKQISVVLDGLLRCAHWIVAGTVIGGEKKKSEKARLRKGLNILVATPGRLADHLENTKVLDVSNVRWLVLDEGDRLMDLGFEEEIQGIIKKLDERRRPSKIPDLPAKRTTILCSATLKMNVQRLGEISLKEAIHIKADPADEDDEQKDGSKQPEFSAPAQLKQSYAVVAAKLRLVTLTALLKRTFARKGSVMKAIIFVSCADSVDFHFEVFTRRESSEELPDADDENAPSSSNVHGSIATASAFSNPSNNVILHKLHGSLPQHVRTATLSAFAKQKDASVLICTDVAARGLDLPNVDFVIEYDPAFCSDDHLHRIGRTARLGRDGRALIFLLPGNEEGYREGSSNSVTRNEVNEILKRGFGGNSEAISKGWEDKATDWQLDIERWALEDSTILEMARRAYQSHIRAYATHIAAERHMFNIKDLHLGHLAKSFALRDRPAKINVPGLRPGNEDTKKSFKADRKLASGEKRKMSAREDSSSTTDAAEARKKMQQKLKEHMAGASEFNIA SW:ID DBP7_COCIM SW:DE RecName: Full=ATP-dependent RNA helicase DBP7; EC=3.6.1.-; SW:GN Name=DBP7; ORFNames=CIMG_00674; SW:KW ATP-binding; Complete proteome; Helicase; Hydrolase;Nucleotide-binding; Nucleus; Ribosome biogenesis; RNA-binding;rRNA processing. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->761|DBP7_COCIM|0.0|100.0|761/769| GO:SWS:NREP 8 GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0004386|"GO:helicase activity"|Helicase| GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0005634|"GO:nucleus"|Nucleus| GO:SWS GO:0042254|"GO:ribosome biogenesis"|Ribosome biogenesis| GO:SWS GO:0003723|"GO:RNA binding"|RNA-binding| GO:SWS GO:0006364|"GO:rRNA processing"|rRNA processing| SEG 55->68|nsnnpqnpnkinvp| BL:PDB:NREP 1 BL:PDB:REP 154->585|3i5xA|7e-36|34.4|366/509| RP:PDB:NREP 1 RP:PDB:REP 152->580|1cu1A|6e-42|11.1|305/645| RP:PFM:NREP 2 RP:PFM:REP 182->371|PF00270|3e-28|49.7|159/167|DEAD| RP:PFM:REP 509->574|PF00271|3e-12|44.6|65/76|Helicase_C| HM:PFM:NREP 2 HM:PFM:REP 180->378|PF00270|2.4e-43|40.1|167/167|DEAD| HM:PFM:REP 508->576|PF00271|3.7e-21|44.1|68/78|Helicase_C| GO:PFM:NREP 6 GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00270|IPR011545| GO:PFM GO:0005524|"GO:ATP binding"|PF00270|IPR011545| GO:PFM GO:0008026|"GO:ATP-dependent helicase activity"|PF00270|IPR011545| GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00271|IPR001650| GO:PFM GO:0004386|"GO:helicase activity"|PF00271|IPR001650| GO:PFM GO:0005524|"GO:ATP binding"|PF00271|IPR001650| RP:SCP:NREP 2 RP:SCP:REP 154->390|1fuuA|1e-32|29.1|203/215|c.37.1.19| RP:SCP:REP 320->587|2fwrA1|5e-20|16.0|194/200|c.37.1.19| HM:SCP:REP 135->392|1wrbA1|6.6e-51|37.4|238/0|c.37.1.19|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 316->593|2fwrA1|1.1e-32|34.5|200/0|c.37.1.19|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 8930 OP:NHOMOORG 1063 OP:PATTERN ---1--1111111121-1-----1--------1111111111111111-2112----1111111--11 111-333333332332322-23113322222233333555-32333432444333323--4432333564211111111131-11111443413221--51553268715--------------222122222212111111111121-1111----12122111-2222111111111111131111--1124555555554555555334444555222325444444454222222222222222222223323333323222223322322222211121112332222222222222222222222222222222223-523655555555553422433334-1-121113334-1111------113-3323322212333333223333333333333333-3333333323223333333333333323333233333324444444435553323------------111111111111111111333324444355555554444445544443455544452344454544555554553343353222222222244573625252214333-444523544333364424--1-------1111111115111522997646B6899ACCBCCCCCCBBBCCBBBB1-2222311111154555555555555555-55555555555555555555555544555555555555454455554555541544556644556114511111333325448323333233333333222222222256666666666666666663222222225AAAA999998BBAA44555555553333232-332222--------11212112---1--11---1--11-11112111------33 MNJKQPL3*OOGNNRLOMKMMMMNMNNMMLNONLKLLOJMLLLJKIMMJLOONONOMMLNNNNMLKLNGMNLMMLMNJNOMMKMLLKN-LXPOMPTPMMOOJNWYV8NwPqfqWhWkPOJFOYMjdKrG**c3jZ*INKLYLSaNLTNMLXJAfNdSRUUxkcXRQPbUY*cebRIUSc*cbXOXrhx*LwmVYWSVVW ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 634 STR:RPRED 83.3 SQ:SECSTR #######################################################################################################################HHHHHHHHHTTTTTcTTEEEEccccccccccHEEEEETTEEEEEEEEEHHHHHHHHHHcccccccccccccccccEEEEEEccccccTTTHHHHHHHTTTTcccccGGGccccTcHTccccHTccEEEEEccHHHHHHHHHHHHHHTccccEEcEEEccTTccHEcccccccccccEEEEEHHHHHHHTccTcTTcccEEEEETTTcccHHHHHHHHHHHHHTTTTTccEEEEEEccHHGcccEEEEEEccccTTccHHHHHcccEEEEcccccccccEEcccGcTTccccccTTEEEEEccccccEEETTEEEcGGGTcEEEEHccEEEEEccccHHHHHHHHHHHHTcccccEcccccTTcHHHHHHHHHHccccccHHHHTTccEEEEcTTcccccccccccEETEEEcTTHHHHccccccEEEEccEEEEEEEEcccEEEEEEEEccHHHHHHHHTTEEEEEEHHHHcccHHHHHHHHTTcHHHHHHHHHHHHHHHccccccccccHHHHHHHTTccEHHTTccHHHHGGGHHHHHHHHHTTcHHGTcccccEEEccHHHHHHcHHHcccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccTTccHHHHHHHHHHHHHTTccEEc######## DISOP:02AL 761-762| PSIPRED cccccEEEEEEcccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccHHHccccHHHHHHHHHHcccccccHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEcccHHHHHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHccccEEEEcHHHHHHHHHccccccccccEEEEEEccHHHHccccHHHHHHHHHHHHHHccccccccccccEEEEEEEccccHHHHHHHHHHccccEEEEEccccccccccccccccccccccccEEEEEEEcHHHHHHHHHHHHHHHHcccccccEEEEEEccHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHcccccEEEEccHHHcccccccccEEEEccccccHHHHHHccccccccccccEEEEEEcHHHHHHHHHHHHHHcccccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccccHHHHccHHHccHHHHHHHcccccccccccccccccccHHHHcccccccccccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccccc //