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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_00739
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  165/199 : Viruses  0/175   --->[See Alignment]
a.22.1
:192 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   20->99 1n1jB PDBj 2e-13 41.0 %
:RPS:PDB   32->100 2bykA PDBj 6e-13 30.9 %
:RPS:SCOP  20->99 1n1jB  a.22.1.3 * 3e-14 39.7 %
:HMM:SCOP  29->101 2bykA1 a.22.1.3 * 1.4e-18 52.8 %
:RPS:PFM   19->84 PF00808 * CBFD_NFYB_HMF 7e-07 42.2 %
:HMM:PFM   19->84 PF00808 * CBFD_NFYB_HMF 1.6e-17 42.2 64/65  
:BLT:SWISS 19->100 DPB3_DEBHA 1e-16 47.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_00739 GT:GENE CIRG_00739 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 192 SQ:AASEQ MPYNTAAIPPRKEASGRTALPLTRIKKIIHLDEDIAQCSNNAAFLIAVATEMFIRYLAEQSYNVVKSERKPRKTIQYKDLATAVSRIDNLEFLSDVIPKTTTYKQFKEKRAREAAKESERPKGQRTLNRKGLAASGESVTSREESMVNLDANGAQSSPRPPMVIHSSRTRSALVNEEPADEEPVDKDVNMSG BL:SWS:NREP 1 BL:SWS:REP 19->100|DPB3_DEBHA|1e-16|47.5|80/277| SEG 107->120|kekrareaakeser| BL:PDB:NREP 1 BL:PDB:REP 20->99|1n1jB|2e-13|41.0|78/78| RP:PDB:NREP 1 RP:PDB:REP 32->100|2bykA|6e-13|30.9|68/72| RP:PFM:NREP 1 RP:PFM:REP 19->84|PF00808|7e-07|42.2|64/65|CBFD_NFYB_HMF| HM:PFM:NREP 1 HM:PFM:REP 19->84|PF00808|1.6e-17|42.2|64/65|CBFD_NFYB_HMF| GO:PFM:NREP 2 GO:PFM GO:0005622|"GO:intracellular"|PF00808|IPR003958| GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF00808|IPR003958| RP:SCP:NREP 1 RP:SCP:REP 20->99|1n1jB|3e-14|39.7|78/78|a.22.1.3| HM:SCP:REP 29->101|2bykA1|1.4e-18|52.8|72/0|a.22.1.3|1/1|Histone-fold| OP:NHOMO 323 OP:NHOMOORG 165 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----41------112112111111111111111111-1-1111111111112122211122221111122-122211-1121212211---1111111111-2333-2-15442221-1--12142231FE1-31111112-231111121--3214322113113-32-3--2211-1E2211165492C3-12221- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 91 STR:RPRED 47.4 SQ:SECSTR ##########cHHHHHTccccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHTTccTcccccHHHHHHHHHTccTTGGGTTTccccH########################################################################################### PSIPRED cccccccccccccHHccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHcccccHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccccc //