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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_00769
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  193/199 : Viruses  0/175   --->[See Alignment]
e.25.1
:710 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   8->604 1fvhA PDBj 2e-59 31.4 %
:RPS:PDB   8->593 3c98A PDBj 1e-41 29.0 %
:RPS:SCOP  8->593 1dn1A  e.25.1.1 * 1e-96 30.9 %
:HMM:SCOP  1->609 1mqsA_ e.25.1.1 * 1.7e-143 33.2 %
:RPS:PFM   26->411,488->600 PF00995 * Sec1 3e-53 34.2 %
:HMM:PFM   25->599 PF00995 * Sec1 1.8e-137 29.2 551/563  
:BLT:SWISS 4->618 SEC1_SCHPO 2e-86 35.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_00769 GT:GENE CIRG_00769 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 710 SQ:AASEQ MDSSLIEVQRKIILDTVRYTAEREWKVLVVDALSKKLIDNAVKEDDILNANVTNIEQIEHRRPMNQETDAVYFLSPLPHIVDCLIADLQRRRYRRAFLVWTARLDPQLRSRINGLSMARDLIADFRIVNINYFPRESHLVIFRDPWSFPTLFHPACNNLVRGHLEDLAQRIVSVCVSLGEYPVIRYYRPKAPTHEASVLCSHLARFVQDELDAYAKSREDFPTASRQRGLLYIVDRTLDLVAPLVHEFTYQAMAHDLLPIKEGEKVTYETTINAGEPNQETKELEISENDSIWVESRHLHMKDLLGKLVDDFNQFRAKNPQFADNDSSANVNTIRDMLAGLSKFQEGKNSYTLHLNMAEECMQLFQDRNLPELASVEQSLGTGLDEDYRKPKNLTDQLVRLLDDERVRPPDRLRLIVLYLLYRGGLLGGDIKKLLAHSQLPPQDGEVIYNFDLLGARVEKPLSDTKPPNQPLFARKPPAQINEDDTSLSRFEPNLKLMLQEQIRGTLDTSVFPSTRPHADGDDVISQDNVSQASLRSAKPTWARIRPSAAEPRQKIIVFMAGGATYSEARSCYELSQNHNKDIYLVTSHMLTPGLFLRQVGDLSVDKRRLNLPADQPKPQAPRHLFEREPSPKPQVQPQPQPLTASKSLAPPTSGLAAMTMSSQDDPRRVKSLGESAPPRPQPMLSKSEQKLSKKDKDKKDKEKKKRFFK BL:SWS:NREP 1 BL:SWS:REP 4->618|SEC1_SCHPO|2e-86|35.8|600/693| SEG 412->435|rlrlivlyllyrggllggdikkll| SEG 630->642|pspkpqvqpqpqp| SEG 685->706|lskseqklskkdkdkkdkekkk| BL:PDB:NREP 1 BL:PDB:REP 8->604|1fvhA|2e-59|31.4|529/546| RP:PDB:NREP 1 RP:PDB:REP 8->593|3c98A|1e-41|29.0|528/556| RP:PFM:NREP 1 RP:PFM:REP 26->411,488->600|PF00995|3e-53|34.2|469/553|Sec1| HM:PFM:NREP 1 HM:PFM:REP 25->599|PF00995|1.8e-137|29.2|551/563|Sec1| GO:PFM:NREP 2 GO:PFM GO:0006904|"GO:vesicle docking during exocytosis"|PF00995|IPR001619| GO:PFM GO:0016192|"GO:vesicle-mediated transport"|PF00995|IPR001619| RP:SCP:NREP 1 RP:SCP:REP 8->593|1dn1A|1e-96|30.9|525/556|e.25.1.1| HM:SCP:REP 1->609|1mqsA_|1.7e-143|33.2|572/653|e.25.1.1|1/1|Sec1/munc18-like (SM) proteins| OP:NHOMO 660 OP:NHOMOORG 193 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1222333-612-3353323333323233333333333333333222333332332223333333232312232323313232222433-21233233333231444-23335B54873233433893527U5-5582322424552423243362745522242331633556432323K222235357354213322- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 580 STR:RPRED 81.7 SQ:SECSTR #######HHHHHHHHTHHHHccTccEEEEEcHHHHHHHHTTccHHHHTTTTEEEEEETTccccccTTccEEEEEcccHHHHHHHHHTTTcGGGcccccEEEEEcccccHHHHHHHHTcGGGGTEEEEEEcccEEccccEEEcccTTHHHHHHcGGGTTccHHHHHHHHHHHHHHHHHHTcccEEEEcTTcHHHHHHHHHHHHHHHHHHHHHHHHHHcTTTTccTTTTccEEEEEEGGGcccTTTcccccHHHHHHHHccccTTTEEEEEEEcEEccccEEEEEEEccTTcHHHHHHTTccHHHHHHHHHHHHHHHHHHTTcccccTTcccccccccTTTTcGGGHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHcccTTccccccTHHHHHHHHTcTTccHHHHHHHHHHHHHHTTcccHHHHHHHHHHHTccHHHHHHHHHGGGGTcccccccTTTccccccccccGccccccccccTTcccccHHHHHHHHHHTTcccTTTccccccc#############ccccccccc#######cccccccEEEEEEETcEEHHHHHHHHHHHHHHccEEEEEEccEEcHHHHHHHHHTTcccc####################################################################################################### PSIPRED cccHHHHHHHHHHHHHHccccccEEEEEEEcHHHHHHHHHHccHHHHHHcccEEEEEEcccccccccccEEEEEcccHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHHHHHEEEEEEEEccEEEEcccEEcccccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHHccccccEEEcccccccccccccEEEEEcccccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccEEEcccHHHHHHHHHHHHcccccHHHcccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccHHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHccccHHHcccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccHHHHHHHHHcc //