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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_00782
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  90/915 : Eukaryota  151/199 : Viruses  0/175   --->[See Alignment]
d.161.1
:225 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   121->200 2jyaA PDBj 1e-11 39.7 %
:RPS:SCOP  64->161 1i1qA  d.161.1.1 * 8e-04 11.8 %
:RPS:PFM   122->212 PF04800 * ETC_C1_NDUFA4 3e-20 56.8 %
:HMM:PFM   120->220 PF04800 * ETC_C1_NDUFA4 7.5e-39 51.0 98/101  
:HMM:PFM   36->89 PF11498 * Activator_LAG-3 0.00099 35.2 54/468  
:BLT:SWISS 16->225 NDUS4_NEUCR 3e-62 57.2 %

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_00782 GT:GENE CIRG_00782 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 225 SQ:AASEQ MSLLRPGRININAGCARAARLAYPVNARFVSSSAPRQLDEKAPKTSPEDAPTDVSRGGSMIRRESPSEAMARHQPDYNATVDQATSLFSPVPKRVMDGSEPGDIVAAAVLSGAPTDLQARTVRIYRPAKPATQSGTWHDHHWRMDWDVLSKGHRWENPLMGWQSSADAMQGTHINFKSKEDAIRFAEKQGYEYYVQEPNERAFHPKAYANNFLHVPKKLKHIRTK BL:SWS:NREP 1 BL:SWS:REP 16->225|NDUS4_NEUCR|3e-62|57.2|208/218| BL:PDB:NREP 1 BL:PDB:REP 121->200|2jyaA|1e-11|39.7|78/80| RP:PFM:NREP 1 RP:PFM:REP 122->212|PF04800|3e-20|56.8|88/96|ETC_C1_NDUFA4| HM:PFM:NREP 2 HM:PFM:REP 120->220|PF04800|7.5e-39|51.0|98/101|ETC_C1_NDUFA4| HM:PFM:REP 36->89|PF11498|0.00099|35.2|54/468|Activator_LAG-3| GO:PFM:NREP 3 GO:PFM GO:0005743|"GO:mitochondrial inner membrane"|PF04800|IPR006885| GO:PFM GO:0016651|"GO:oxidoreductase activity, acting on NADH or NADPH"|PF04800|IPR006885| GO:PFM GO:0022900|"GO:electron transport chain"|PF04800|IPR006885| RP:SCP:NREP 1 RP:SCP:REP 64->161|1i1qA|8e-04|11.8|93/513|d.161.1.1| OP:NHOMO 261 OP:NHOMOORG 241 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111-----111111111111111111111111-111111-1--1-11111111111111111-12111-11111111111111-1-11111-111111---------------11111---1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------1-----111111-11111111111111111-11111111111111111-1111111111----1--111------11111---11111111111111112-121--211111--113111-1-141-121111111121111111--1121111--1-1111111111112115---112122111--1111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 78 STR:RPRED 34.7 SQ:SECSTR ########################################################################################################################EEEEEcccccccTTTTcccccEEEEEE##EEccccccTTTccccccccEEEEEEEEccHHHHHHHHHHHTcEEEEcccTT######################### PSIPRED ccccccccccEEEEEHHHHHHHHccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHccccccEEEccccccccccHHHHHcccccccccccHHHcccccHHcccEEEEEcccccccccccccccEEEEEEEEcccccccccccccEEccccccccEEEEEccHHHHHHHHHHccccEEEEcccccccccccHHHHcccccccEEEEEcc //