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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_00788
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  193/199 : Viruses  0/175   --->[See Alignment]
c.55.3
:316 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   121->273 1wljA PDBj 6e-27 41.7 %
:RPS:PDB   118->288 3cg7B PDBj 7e-23 16.5 %
:RPS:SCOP  119->286 1wljA  c.55.3.5 * 2e-38 40.9 %
:HMM:SCOP  119->291 1wljA_ c.55.3.5 * 6.7e-32 31.5 %
:RPS:PFM   121->268 PF00929 * Exonuc_X-T 2e-14 36.4 %
:HMM:PFM   120->272 PF00929 * Exonuc_X-T 4.4e-32 34.9 152/165  
:BLT:SWISS 106->299 REXO4_ASPFU 2e-81 72.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_00788 GT:GENE CIRG_00788 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 316 SQ:AASEQ MDLKDLSSNWKKLQSTLKKSSTSTVSKRSASEQVRQNGVKRRRQSSSRHTHTNTSIEKRERVFKKRKMSSVTAEVADAVEKLAVDGDAKTKEPTIQLTGNDIGRERINEGLSATAEAGKYIAIDCEMVGVGPDPDRESALARVSIVNFAGDQVYDSFVRTKEEVTDWRSKVSGITPESMEHARSFEEVQKDVASLLDGRILIGHAVKNDLNALLLSHPKHDIRDTSLHPPYRKIAGGAKPRLKILAAELLGLQIQGAAHSSVEDARATMLLFQRDKESFERENAKRWPVRVRKDADKDGAGSPKTKKKPKKKRKKR BL:SWS:NREP 1 BL:SWS:REP 106->299|REXO4_ASPFU|2e-81|72.2|194/310| SEG 11->31|kklqstlkksststvskrsas| SEG 41->55|rrrqsssrhthtnts| SEG 303->315|pktkkkpkkkrkk| BL:PDB:NREP 1 BL:PDB:REP 121->273|1wljA|6e-27|41.7|151/168| RP:PDB:NREP 1 RP:PDB:REP 118->288|3cg7B|7e-23|16.5|170/295| RP:PFM:NREP 1 RP:PFM:REP 121->268|PF00929|2e-14|36.4|143/163|Exonuc_X-T| HM:PFM:NREP 1 HM:PFM:REP 120->272|PF00929|4.4e-32|34.9|152/165|Exonuc_X-T| RP:SCP:NREP 1 RP:SCP:REP 119->286|1wljA|2e-38|40.9|164/168|c.55.3.5| HM:SCP:REP 119->291|1wljA_|6.7e-32|31.5|168/0|c.55.3.5|1/1|Ribonuclease H-like| OP:NHOMO 818 OP:NHOMOORG 193 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1111333-31--1223434322242332222222223212122222322232212232222233433323434244433443434323-384454553462421431431767786B6534474HA6E5RmA1AAA3542C36A41633294-75653533-29363945663451135C6551441243826544342 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 221 STR:RPRED 69.9 SQ:SECSTR ############################################################################TccccccHHHHccccccEEEEEccHHHHHHHHHHHHHHccccEEEEEEEEEcccTTcccccccEEEEEEETEEEEEEEEEEccccccccHHHHHHHcccHHHHHTcccHHHHHHHHHHHHTTcEEEEEcccHHHHHHTTccccGGGcEEEEHHHHcccccccccHHHHHHHHHHTccccccTTcHHHHHHHHHHHHHHHHHTTccccccEEEEcccGHHHH################### DISOP:02AL 316-317| PSIPRED cccccccccHHHHHHHHHcccccccccccccccccccccccccccEEEcccccccccccHHHHccccccccccccccHHHHHHHccccccccccccccccHHHHHHHccccccccccccEEEEEEEcccccccccEEEEEEEEEEEEccccEEEEEEEcccccccHHHHHHHcccHHHHcccccHHHHHHHHHHHHcccEEEEcccHHHHHHHHHHcccccccHHHHHHHHHHHcccccccHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHccc //