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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_00791
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  157/199 : Viruses  0/175   --->[See Alignment]
d.13.1d.246.1
:318 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   14->255 1st0A PDBj 7e-36 32.6 %
:RPS:PDB   14->309 3bl9B PDBj 2e-54 27.3 %
:RPS:SCOP  7->109 1st0A2  d.246.1.1 * 3e-24 23.5 %
:RPS:SCOP  111->305 1st0A1  d.13.1.3 * 1e-23 29.4 %
:HMM:SCOP  7->111 1vlrA2 d.246.1.1 * 3.3e-28 44.0 %
:HMM:SCOP  111->310 1st0A1 d.13.1.3 * 1.8e-55 35.9 %
:RPS:PFM   8->111 PF05652 * DcpS 2e-24 49.0 %
:RPS:PFM   143->251 PF11969 * DcpS_C 1e-11 37.0 %
:HMM:PFM   9->111 PF05652 * DcpS 1.1e-31 37.9 103/105  
:HMM:PFM   141->257 PF11969 * DcpS_C 3.6e-30 40.7 108/114  
:BLT:SWISS 23->274 DCPS_SCHPO 2e-52 37.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_00791 GT:GENE CIRG_00791 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 318 SQ:AASEQ MSGKSEAESLIPRFRIERLLNQDQNDRRISILGSIHDQPGVLIIERAAFVADIGSLKAFHAALGNVTNLGANDIYRWYMASSGQNHVNPPDLKLNLIWPCTEQHVLKYSAQNVRMVTETPEIYQKYVRPYMQEKRGNGRLNWVFNIIEGRKEQEDVLHRESDPEEGFLLLPDLNWDRKTIGTLRLLALVERRDIWSMRDLRKSHVVWLKQMRQKLLEAVVKVYPELDTDQLKLYIHYHPTYYHLHIHVVNVMLEAGTTQSTGKAFGLENLISQLDAMAGDADASMADVPVSFFLGESSELWTSIFGPLKRGETPSSGH BL:SWS:NREP 1 BL:SWS:REP 23->274|DCPS_SCHPO|2e-52|37.6|250/304| SEG 275->287|damagdadasmad| BL:PDB:NREP 1 BL:PDB:REP 14->255|1st0A|7e-36|32.6|230/300| RP:PDB:NREP 1 RP:PDB:REP 14->309|3bl9B|2e-54|27.3|282/289| RP:PFM:NREP 2 RP:PFM:REP 8->111|PF05652|2e-24|49.0|102/102|DcpS| RP:PFM:REP 143->251|PF11969|1e-11|37.0|100/113|DcpS_C| HM:PFM:NREP 2 HM:PFM:REP 9->111|PF05652|1.1e-31|37.9|103/105|DcpS| HM:PFM:REP 141->257|PF11969|3.6e-30|40.7|108/114|DcpS_C| GO:PFM:NREP 3 GO:PFM GO:0000290|"GO:deadenylation-dependent decapping of nuclear-transcribed mRNA"|PF05652|IPR008594| GO:PFM GO:0005515|"GO:protein binding"|PF05652|IPR008594| GO:PFM GO:0016787|"GO:hydrolase activity"|PF05652|IPR008594| RP:SCP:NREP 2 RP:SCP:REP 7->109|1st0A2|3e-24|23.5|98/108|d.246.1.1| RP:SCP:REP 111->305|1st0A1|1e-23|29.4|187/192|d.13.1.3| HM:SCP:REP 7->111|1vlrA2|3.3e-28|44.0|100/107|d.246.1.1|1/1|mRNA decapping enzyme DcpS N-terminal domain| HM:SCP:REP 111->310|1st0A1|1.8e-55|35.9|192/192|d.13.1.3|1/1|HIT-like| OP:NHOMO 177 OP:NHOMOORG 157 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------11111111111111111111111111111111-11111111-1111-211111-12111122-1211111111-121111111111111111---112121-111111132-11141-111111-21-11-11111--1112111111111111111121-1111111-1----1---12112- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 292 STR:RPRED 91.8 SQ:SECSTR #############cEEEEEEEEETTTTEEEEEEEcccEEEEEEEEEccccHHHHHHHHHHTcccEEEEEEEETTEEEEEEEccGGGEEcccEEEEEEccccHHHHHHHccccEEEEEEcHHHHHHTHHHHHHTcccccccHHHHHHHTTcccGGGccEEEccTTTcEEEEEcTTccccccTTcEEEEEEcccccccGGGccGGGHHHHHHHHHHHHHHHHHHHccccGGGEEEEEEccccccccEEEEEETTccccTTccTTTEEEHHHHHHHHHHcTTHHHHccEEEE####EETTcHHHHHHHHHHc######### PSIPRED cccHHHHHHHccccEEEEEEcccccccEEEEEEEEccccEEEEEEcccccccHHHHHHHHccHHHHHHHHccccEEEEEEccccccccccccEEEEEccccHHHHHHHHHccEEEEEEcHHHHHHHHHHHEEccccccccHHHHHHHcccccHHHHccccccccccEEEEEccccccccHHHEEEEEEEEccccccHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEccccccEEEEEEEEEEcccccccccccHHHHHHHHHHHHHccccccccHHHccccEEEEcccHHHHHHHHHHHHccccccccc //