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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_00796
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  530/915 : Eukaryota  196/199 : Viruses  0/175   --->[See Alignment]
b.40.4d.104.1
:578 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   172->578 1x54A PDBj 1e-69 40.5 %
:RPS:PDB   169->578 1asyA PDBj 4e-50 25.6 %
:RPS:SCOP  167->238 1c0aA1  b.40.4.1 * 3e-10 30.6 %
:RPS:SCOP  254->571 1bbuA2  d.104.1.1 * 3e-64 23.4 %
:HMM:SCOP  139->239 1c0aA1 b.40.4.1 * 1.5e-18 25.7 %
:HMM:SCOP  254->574 1bbuA2 d.104.1.1 * 3.8e-86 37.1 %
:RPS:PFM   262->571 PF00152 * tRNA-synt_2 4e-46 37.9 %
:HMM:PFM   256->572 PF00152 * tRNA-synt_2 5.7e-74 28.3 304/323  
:HMM:PFM   156->234 PF01336 * tRNA_anti 1.1e-10 33.3 72/76  
:BLT:SWISS 9->578 SYNC_DEBHA e-155 54.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_00796 GT:GENE CIRG_00796 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 578 SQ:AASEQ MAPSAPNTIYIDEDVGRDDESAAGTDLSPYKTLVYAFLQHPPSTEDIQYLTRKSETGPVGEDGDPSVRLEWKPATKSALKKATNLFEARKKKAAKEHELALRQKEEAEKRQLVLEAAKKVVIKEDASLPKPVRIRLYEKDPAKVKLRDGDTPGTRVRVLGRVHRLRSQKDVIFVTLSDGYGFLQCVFTGDLVKTYDAMTLTLETSIAVHGEMCAVPPKQHAPDNRELHADFFTVIGRAAGDKEAITTRVAPDADPQTLYDNRHLVLRGEIASSVMKVRAAVIRAFRSAFEEQRMLEVTPPAMVQTQVEGGSTLFSFDYYGEPAYLTQSSQLYLETCLPSLGDVFCICPSFRAEKSLTRRHLSEYTHIEAELDFITFDDLLDHLEVIICRVLDLVLADPQIAGYIKSLNPDFKPPSRPFKRMKYAEAIDWLREHNIPNEEGNPHTFGDDIAEAAERKMTDTMNQTIFLTHFPVEIKAFYMRKDPEDLRVTESVDVLMPGVGEIVGGSMRMEDWDELMGAYASRGMDPTPYYWYTDQRKYGTSPHGGYGLGVERFLAWMCGRYTVRECCLYPRFTGRCTP BL:SWS:NREP 1 BL:SWS:REP 9->578|SYNC_DEBHA|e-155|54.8|549/552| SEG 87->102|earkkkaakehelalr| SEG 155->166|rvrvlgrvhrlr| BL:PDB:NREP 1 BL:PDB:REP 172->578|1x54A|1e-69|40.5|390/434| RP:PDB:NREP 1 RP:PDB:REP 169->578|1asyA|4e-50|25.6|406/490| RP:PFM:NREP 1 RP:PFM:REP 262->571|PF00152|4e-46|37.9|301/337|tRNA-synt_2| HM:PFM:NREP 2 HM:PFM:REP 256->572|PF00152|5.7e-74|28.3|304/323|tRNA-synt_2| HM:PFM:REP 156->234|PF01336|1.1e-10|33.3|72/76|tRNA_anti| GO:PFM:NREP 6 GO:PFM GO:0000166|"GO:nucleotide binding"|PF00152|IPR004364| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF00152|IPR004364| GO:PFM GO:0005524|"GO:ATP binding"|PF00152|IPR004364| GO:PFM GO:0005737|"GO:cytoplasm"|PF00152|IPR004364| GO:PFM GO:0006412|"GO:translation"|PF00152|IPR004364| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF00152|IPR004364| RP:SCP:NREP 2 RP:SCP:REP 167->238|1c0aA1|3e-10|30.6|72/106|b.40.4.1| RP:SCP:REP 254->571|1bbuA2|3e-64|23.4|308/342|d.104.1.1| HM:SCP:REP 139->239|1c0aA1|1.5e-18|25.7|101/0|b.40.4.1|1/1|Nucleic acid-binding proteins| HM:SCP:REP 254->574|1bbuA2|3.8e-86|37.1|313/342|d.104.1.1|1/1|Class II aaRS and biotin synthetases| OP:NHOMO 1528 OP:NHOMOORG 794 OP:PATTERN 11313111111111113333333111111111111111111111111111111122323223333122 111-1----------------------------------1--11-1---111------11--1---------------1--1------1111111111111111111111--------------1-----------11111---111111111--11------111-1111------------22122111122333333232333333212221333222-2111111111-211111111111111111111112112111122111111111111111111111111111111111121111211211111111111111-2132222232223121222232321111-21-22111-1-------1111-11--------1-1---1-11111------------------------1------------11-----------------------1---1--1-1--1-------------------------------------------------------------------------------------11-1-11--1---11212112111112112111121111111111-----------------------1---1111-11111111111121111121121211------22111111111111111111111-111111111111111111111111111111111111121111111111111111111111111112111-----22221-11-111111111111111------1111--------------------11111111-1111111111111121211112222222----1111111111111111111111-111212122211111111112211-1----11 3422432-93323334454454444444444444444444444333445544454453444433333323333333313333333333-47343434443334334236373738463243333463414L3-3353232533433323432254333435C34334334553433223a4332245A64735463333 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 474 STR:RPRED 82.0 SQ:SECSTR ########################################################################################################HHHHHHHHHHHHTTccTTcccccccccccHHHHHHHHTTccHHHHHHHccEEEEEEEEEEEEccTTEEEEEEEccccEEEEEEEccTTcccHHHTccTTcEEEEEEEEEEcccccccccTEEEEEEEEEEEEccccccccHHHHHccHHHHHHHHHTHHHHTTcTTHHHHHHHHHHHHHHHHHHHHHTTcEEcccccEEccccTTTTcccccccTTcccEEccccHHHHHHHHHTTccEEEEEEEccccccccccccccEEEEEEEEEcccTHHHHHHHHHHHHHHHHHHHHHcHHcTHHHHHHTTccccccccEEEEHHHHHHHHHcHTTccccccccccHHHHHHHHHHHHHHHcccEEEEEcccTTcccTTcccccccTTccccEEEEETTEEEEEEEEEEcccHHHHHHHHHHTTccTTHHHHHHHTTTTccccEEEEEEEHHHHHHHHHTcccGGGGcccccccccccc DISOP:02AL 578-579| PSIPRED ccccccccEEEcccccccccccccHHHHHHHHHHHHHHHcccccccEEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHcccccccEEEEEEEEEEEcccccEEEEEEEcccEEEEEEEEcccccHHHHHccccccEEEEEEEEEEccccccccccEEEEEEEEEEEEccccccccccccccccccHHHHHcccEEEEEcHHHHHHHHHHHHHHHHHHHHHHHcccEEEcccEEcccccccccccEEEEcccccEEEccccHHHHHHHHHccccEEEEEEEEEccccccccccccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHccccEEEHHHcccccccccccccEEEEHHHHHHHHHHcccccHHHcccccccHHHHHHHccHHHHccccEEEEcccHHHcHHccccccccccHHEEEEEEEccHHHcccHHHccccHHHHHHHHHHccccHHHHHHHHHHHHHccccccEEEEcHHHHHHHHcccccHHHEEccccccccccc //