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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_00800
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  47/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:750 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  21->57 1iunA  c.69.1.10 * 9e-04 27.0 %
:RPS:PFM   275->416 PF05764 * YL1 3e-16 45.1 %
:RPS:PFM   543->619 PF11258 * DUF3048 6e-04 31.2 %
:RPS:PFM   650->679 PF08265 * YL1_C 7e-08 60.0 %
:HMM:PFM   163->417 PF05764 * YL1 3.9e-70 45.5 233/245  
:HMM:PFM   651->679 PF08265 * YL1_C 6.5e-17 58.6 29/30  
:BLT:SWISS 275->416,652->682 VPS72_SCHPO 5e-08 31.6 %
:BLT:SWISS 551->681 VPS72_PONAB 6e-08 43.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_00800 GT:GENE CIRG_00800 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 750 SQ:AASEQ MYRRCRSSLIVIDTLQSMISRYPDAVPPFHRRTMRKRAPRAILVCPKKAGHMTSVEELFTLATWRISLASQFTSEEESREPNTEYSVVNHPFRGCTLWGFNLSLASAVTVSSDLCATSKTQRKPPGTWRVAIALIPSDKHSMADSPETNDATSSDGEPIEYLATARARRSTAGQHMSSLLDAEADDDLALLFAEDEEDEEFTFGEHEEEGEDDGVVADYAEDMDLDSSSDEEDQGPDAKEDELEGERELEKQAKAERLAKKRKAQESLRLTALRKKVKIDPNLPSRSLTTPAPRQRKKSERISWLPTPEDGPTRSSSRMQTVRNKELTHARLKDSEQRRIRLIATMEEAARRKESKKAKQMTQEERLAEAEKTERINSKSLNRWEEMEKKRSEEQRARLEALQNRRLEGPVVTWWSGIAKWIDDKLAQVGVRSYTQAAEKEAGRKRKSNDVTHQGPPKAGQSKPSRQQEPDLKTEKAQSEIANSAKTVHPPANEDAPKDPKDEPKEPPGEGSVLLDGIHLYASMTDETLSVPADQSSTAQSAKVVADEGDPTQSTPGPTTTARLSEGAAPAPEPKSKIPRRKNHGTDSTSAVLAGVNATPPTQVAPKIEISSRNCIILEDFDATTPQARSQYSILFNPRKPQKLQKPAQEYCPVTGRPARYRDPQTGIGYANTQAYREIRQVLWGSIRLEWLPGMLCGRTWRGRTGRARAFLGSKRAAATGDSRAAATRQRRGYHRQVIPYRYYGCCYSY BL:SWS:NREP 2 BL:SWS:REP 275->416,652->682|VPS72_SCHPO|5e-08|31.6|164/316| BL:SWS:REP 551->681|VPS72_PONAB|6e-08|43.1|102/364| SEG 179->218|lldaeadddlallfaedeedeeftfgeheeegeddgvvad| SEG 221->233|edmdldsssdeed| SEG 240->266|edelegerelekqakaerlakkrkaqe| SEG 347->359|eeaarrkeskkak| SEG 494->508|edapkdpkdepkepp| SEG 698->710|grtwrgrtgrara| SEG 716->729|raaatgdsraaatr| RP:PFM:NREP 3 RP:PFM:REP 275->416|PF05764|3e-16|45.1|133/234|YL1| RP:PFM:REP 543->619|PF11258|6e-04|31.2|77/283|DUF3048| RP:PFM:REP 650->679|PF08265|7e-08|60.0|30/30|YL1_C| HM:PFM:NREP 2 HM:PFM:REP 163->417|PF05764|3.9e-70|45.5|233/245|YL1| HM:PFM:REP 651->679|PF08265|6.5e-17|58.6|29/30|YL1_C| GO:PFM:NREP 4 GO:PFM GO:0003677|"GO:DNA binding"|PF05764|IPR008895| GO:PFM GO:0003700|"GO:transcription factor activity"|PF05764|IPR008895| GO:PFM GO:0005634|"GO:nucleus"|PF05764|IPR008895| GO:PFM GO:0045449|"GO:regulation of transcription"|PF05764|IPR008895| RP:SCP:NREP 1 RP:SCP:REP 21->57|1iunA|9e-04|27.0|37/272|c.69.1.10| OP:NHOMO 47 OP:NHOMOORG 47 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------111-11111111111111111111111111-1111111111111111------------------------------1------------------------------------------------------------------------------------------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 31-31,34-34,39-39,45-45,48-48,81-81,87-87,115-126,129-130,750-751| PSIPRED ccccccccEEHHHHHHHHHHHcccccccHHHHHHHHHcccEEEEcccccccHHHHHHHHHHHHEEEEHHHHHccHHHHccccccEEEccccccccEEEEEEEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccHHHHHHHHHHHHHHHHHHccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHccccccccEEEEcccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHccccHHHHHHHHHHHHHHHHcccccccccEEEcccEEcc //