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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_00894
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  61/915 : Eukaryota  197/199 : Viruses  0/175   --->[See Alignment]
b.1.16b.69.4
:572 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   139->315 2o9kC PDBj 2e-26 34.7 %
:RPS:PDB   130->403 2co0A PDBj 1e-30 25.3 %
:RPS:SCOP  83->286 1u4cA  b.69.4.2 * 4e-27 16.5 %
:RPS:SCOP  302->397 1ufgA  b.1.16.1 * 6e-05 8.0 %
:HMM:SCOP  78->407 1erjA_ b.69.4.1 * 4.8e-69 32.4 %
:RPS:PFM   144->210 PF08662 * eIF2A 5e-04 30.8 %
:HMM:PFM   90->118 PF00400 * WD40 0.00013 31.0 29/39  
:HMM:PFM   137->163 PF00400 * WD40 0.00019 29.6 27/39  
:HMM:PFM   172->206 PF00400 * WD40 5.1e-10 28.6 35/39  
:HMM:PFM   212->248 PF00400 * WD40 2.7e-11 40.5 37/39  
:HMM:PFM   252->291 PF00400 * WD40 3.8e-08 43.6 39/39  
:HMM:PFM   299->331 PF00400 * WD40 3.2e-08 34.4 32/39  
:HMM:PFM   373->403 PF00400 * WD40 2.9e-11 38.7 31/39  
:BLT:SWISS 1->468 PFS2_ASPOR 0.0 84.2 %
:REPEAT 3|93->137|139->179|223->263
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_00894 GT:GENE CIRG_00894 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 572 SQ:AASEQ MAFYDEGATESSFIPRPLGPRRPRPVTDYGSSLVQWMRVRQPKYKGGHRLEWERPSASYTVDMLPPFAAIHSPADTIPVRHLHQSIGKSKKPITVVRWTPEGRRLLTGGHTGEFMLWNGTAFNFETVMDAHYDQYQAGVTSAEWSHSHEWLISGGQKGDVKYWRPNFNNVETVDDAHHDAVRDLAWCPNDTRFLSASDDTTLKIFDFNARACELVLAGHGWDVKSCDWHPTKGLLVSGSKDHQVKFWDPRTGRCLTTLHSHKNTVTTTKFSRVNNNLLATSSRDQTGRIFDLRMMRDICILRGHEKPISSLTWHPIHSTLVSTGSEDGSLYHYLLDEPNLPAGQVPTVAPYDTTDPSNTPAQVIFPAHRIQFAHSSTIWSLDWHPLGHILASGSKDNFTRFWSRTRPGETTYLKDRFHIGEEAAEAQGTWNRGFGRRQMREEEEQEIQDEAEGLVDQKRPESLLPGIQGMPPPDGPGLPGLIPGIGAVHPPPPPLPVDIPSSMPHIDPGRLAALLSSGAIPHPPPPQHLLPQNPGQMPFPIPGISGPFPPNPNFPQFPNQMFPPQPAHQQPK BL:SWS:NREP 1 BL:SWS:REP 1->468|PFS2_ASPOR|0.0|84.2|468/610| NREPEAT 1 REPEAT 3|93->137|139->179|223->263| SEG 15->25|prplgprrprp| SEG 436->452|rrqmreeeeqeiqdeae| SEG 469->504|gmpppdgpglpglipgigavhppppplpvdipssmp| SEG 521->532|phppppqhllpq| SEG 537->566|mpfpipgisgpfppnpnfpqfpnqmfppqp| BL:PDB:NREP 1 BL:PDB:REP 139->315|2o9kC|2e-26|34.7|176/303| RP:PDB:NREP 1 RP:PDB:REP 130->403|2co0A|1e-30|25.3|273/304| RP:PFM:NREP 1 RP:PFM:REP 144->210|PF08662|5e-04|30.8|65/192|eIF2A| HM:PFM:NREP 7 HM:PFM:REP 90->118|PF00400|0.00013|31.0|29/39|WD40| HM:PFM:REP 137->163|PF00400|0.00019|29.6|27/39|WD40| HM:PFM:REP 172->206|PF00400|5.1e-10|28.6|35/39|WD40| HM:PFM:REP 212->248|PF00400|2.7e-11|40.5|37/39|WD40| HM:PFM:REP 252->291|PF00400|3.8e-08|43.6|39/39|WD40| HM:PFM:REP 299->331|PF00400|3.2e-08|34.4|32/39|WD40| HM:PFM:REP 373->403|PF00400|2.9e-11|38.7|31/39|WD40| RP:SCP:NREP 2 RP:SCP:REP 83->286|1u4cA|4e-27|16.5|200/322|b.69.4.2| RP:SCP:REP 302->397|1ufgA|6e-05|8.0|96/151|b.1.16.1| HM:SCP:REP 78->407|1erjA_|4.8e-69|32.4|299/0|b.69.4.1|1/1|WD40 repeat-like| OP:NHOMO 6520 OP:NHOMOORG 260 OP:PATTERN --------------------------------------------------22---------------- ----2-------------------1------------1---63A--------------------2---221-----------------------------------1------------------3111211116132215---1-bBF656B----------131CQKQI-------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2--------1-----------------------------------1-------------------------------------------------------------------------1------------4------------------1-------------------1----111139-------------------------1------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------1------------------------------------------------------------------------------------------------1----------- 8746ZcW-RBF4bbeDGHEMLIIIKPJHGCGFFIIEHHFGEFFGHHKVOZJGLTDHFSIIKLNEIEDD6CFCHGECE8BCHEFFDDKK-PeYGNT*HGHJJFGogl5ZKP*m*mhwvXRUOYpS*zK*R***3***QaQQ*OcwZMgWRJpKM*VvefeYn*ZZbYJuaetONllBQUR*IIGMNjXjtKnbBDPVQVd ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 389 STR:RPRED 68.0 SQ:SECSTR ##########################################EEEETTTTEEEccHHHHHHccccGGGHHHHTcccGGGccHHHHHHHHHHHHHHHHHHHccccHHHHTcTTTccccccccccEEEEEcEEEccccccEEEEEEcTTccEEEEEETTccEEEEETTTccEEEEEccccccEEEEEEcTTccEEEEEETTcEEEEEETTTccEEEEEEcccccEEEEEEcTTccEEEEEETTccEEEEETTTccEEEEEccccccEEEEEEcTTTccEEEEEETTccEEEEETTTccEEEEEccTTcccEEEEEEcTTcccEEEEETTTEEEEEETTTTEEEcccccEEEEccTTccEEEEETTTccEEEEEccccccEEEEEEcccccEEEEcTTTccEEEEEEEEcTTEEEEEETTcHHHHHHHHHHHHH############################################################################################################################################# PSIPRED cccccccccccccccEEcccccccccccccccEEEEEEEEcccccccEEEEEEccccEEEEEEcccccEEEEcccccEEEEEEEEEEcccccEEEEEEcccccEEEEEEcccEEEEEEcccccEEEEEEEccccccccEEEEEEcccccEEEEEEccccEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEEcccEEEEEEccccEEEEEEEcccccEEEEEEcccccEEEEEEcccEEEEEEccccEEEEEEEcccccEEEEEEEcccccEEEEEEcccEEEEEEccccEEEEEEEcccccEEEEEEcccccEEEEEEEcccEEEEEEcccccccccccccEEcccccccccccccccccEEEEEccccccEEEEEEcccccEEEEEEcccEEEEEEcccccEEEEEcccccEEEEEEccccEEEEEccccccccccccEEEEEEccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccHHcccccccccccccccccccccccccccccHHHHccc //