[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_00897
DDBJ      :             
Swiss-Prot:PYRF_COCIM   RecName: Full=Orotidine 5'-phosphate decarboxylase;         EC=4.1.1.23;AltName: Full=OMP decarboxylase;         Short=OMPdecase;         Short=OMPDCase;AltName: Full=Uridine 5'-monophosphate synthase;         Short=UMP synthase;

Homologs  Archaea  0/68 : Bacteria  19/915 : Eukaryota  172/199 : Viruses  0/175   --->[See Alignment]
c.1.2c.98.2
:274 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->274 1dqwA PDBj 9e-71 51.9 %
:RPS:PDB   31->262 1eixC PDBj 3e-43 27.6 %
:RPS:SCOP  8->55 1ko7A1  c.98.2.1 * 3e-04 12.5 %
:RPS:SCOP  31->267 1dbtA  c.1.2.3 * 4e-49 21.1 %
:HMM:SCOP  4->276 1dqwA_ c.1.2.3 * 2.9e-53 30.2 %
:RPS:PFM   34->259 PF00215 * OMPdecase 4e-27 41.9 %
:HMM:PFM   33->260 PF00215 * OMPdecase 2.3e-78 53.0 219/223  
:BLT:SWISS 1->274 PYRF_COCIM e-155 98.9 %
:PROS 90->103|PS00156|OMPDECASE

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_00897 GT:GENE CIRG_00897 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 274 SQ:AASEQ MASKSQVPYEDRARDHPNPLARRLFQIATEKQSNVVVSADVTTTKELLDLADRLGPYMVVLKTHIDILADFSAESVTGLQSLSQKHNFLIFEDRKFVDIGNTVQKQYHGGALHISEWAHIVNATVLPGPGIIDALAQVASAPDFPHASDRGLLILATMTSKGSLATGQYTELSVELARKYKGFVLGFVASRSLEGVETAGKADDEDFVLFTTGVNLASKGDALGQQYQTPESAIGGGADFIISGRGIYAAPDPVDAARRYQKAGWDAYLKRVGR SW:ID PYRF_COCIM SW:DE RecName: Full=Orotidine 5'-phosphate decarboxylase; EC=4.1.1.23;AltName: Full=OMP decarboxylase; Short=OMPdecase; Short=OMPDCase;AltName: Full=Uridine 5'-monophosphate synthase; Short=UMP synthase; SW:GN Name=URA3; ORFNames=CIMG_00862; SW:KW Complete proteome; Decarboxylase; Lyase; Pyrimidine biosynthesis. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->274|PYRF_COCIM|e-155|98.9|274/274| GO:SWS:NREP 3 GO:SWS GO:0016831|"GO:carboxy-lyase activity"|Decarboxylase| GO:SWS GO:0016829|"GO:lyase activity"|Lyase| GO:SWS GO:0006221|"GO:pyrimidine nucleotide biosynthetic process"|Pyrimidine biosynthesis| PROS 90->103|PS00156|OMPDECASE|PDOC00141| BL:PDB:NREP 1 BL:PDB:REP 9->274|1dqwA|9e-71|51.9|258/267| RP:PDB:NREP 1 RP:PDB:REP 31->262|1eixC|3e-43|27.6|217/232| RP:PFM:NREP 1 RP:PFM:REP 34->259|PF00215|4e-27|41.9|210/223|OMPdecase| HM:PFM:NREP 1 HM:PFM:REP 33->260|PF00215|2.3e-78|53.0|219/223|OMPdecase| GO:PFM:NREP 2 GO:PFM GO:0004590|"GO:orotidine-5'-phosphate decarboxylase activity"|PF00215|IPR001754| GO:PFM GO:0006207|"GO:'de novo' pyrimidine base biosynthetic process"|PF00215|IPR001754| RP:SCP:NREP 2 RP:SCP:REP 8->55|1ko7A1|3e-04|12.5|48/129|c.98.2.1| RP:SCP:REP 31->267|1dbtA|4e-49|21.1|228/237|c.1.2.3| HM:SCP:REP 4->276|1dqwA_|2.9e-53|30.2|265/0|c.1.2.3|1/1|Ribulose-phoshate binding barrel| OP:NHOMO 233 OP:NHOMOORG 191 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------1------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------1-----------1-------------------------------------------------------------------------1---------------------------------------------1-------------------------------------------------------111---1---------------------------------------------------------11------11111------------------------------------------------------------------------- ----111-----111111111111111111212111111111111111111111-1111111-11111-1111111111111111111-11111111111111-11-1-1112212-1111111111214E1-112111111111111-1111111131133111111111-11111117111112232112------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 274 STR:RPRED 100.0 SQ:SECSTR ccccccccHHHHHHHcccHHHHHHHHHHHHccccEEEEEccccHHHHHHHHTTccTTTcEEEEcHHHHHHHHHHHHHHHHHHHHHTTccEEEEEEEcccHHHHHHHHHHHHTHHTccccEEEEEGGGHHHHHHHHHHHTGTTHHGGGGGccEEEEEccccHHHHGGGTccccHHHHHHHHHTTccEEEccGGTGGHHHHHHHHccccEEEEccccccTTTcccTTccccHHHHHHHTccEEEEcHHHHTcccHHHHHHHHHHHHHHHHHHHHTc DISOP:02AL 274-275| PSIPRED ccccccccHHHHHHccccHHHHHHHHHHHcccccEEEEEEcccHHHHHHHHHHHccccEEEEEcHHHHHcccHHHHHHHHHHHHHcccEEEEEEEEcccHHHHHHHHHHHHHHHcccccEEEEEEcccHHHHHHHHHHHHHHcccccccccEEEEEEEccHHHHHcccHHHHHHHHHHHcccEEEEEEEcccccHHHEEcccccccEEEEcccccccccccccccccccHHHHHHccccEEEEccHHHccccHHHHHHHHHHHHHHHHHHHHcc //