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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01206
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  193/199 : Viruses  0/175   --->[See Alignment]
a.118.17a.4.5e.40.1
:809 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   13->809 2hyeC PDBj 1e-96 36.1 %
:RPS:PDB   429->807 3dqvC PDBj 3e-73 27.8 %
:RPS:SCOP  8->425 2hyeC2  a.118.17.1 * 2e-58 27.9 %
:RPS:SCOP  429->715 2hyeC3  e.40.1.1 * 2e-67 41.3 %
:RPS:SCOP  721->809 1ldjA1  a.4.5.34 * 7e-27 51.1 %
:HMM:SCOP  9->431 1ldjA2 a.118.17.1 * 4.8e-90 34.0 %
:HMM:SCOP  423->714 1ldjA3 e.40.1.1 * 5.4e-87 47.8 %
:HMM:SCOP  717->809 1iuyA_ a.4.5.34 * 5.9e-26 52.2 %
:RPS:PFM   27->695 PF00888 * Cullin 2e-97 42.3 %
:RPS:PFM   735->799 PF10557 * Cullin_Nedd8 7e-14 63.1 %
:HMM:PFM   13->703 PF00888 * Cullin 8.5e-132 33.0 587/589  
:HMM:PFM   736->797 PF10557 * Cullin_Nedd8 7.5e-31 61.3 62/68  
:BLT:SWISS 10->809 CUL3_MOUSE e-137 41.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01208 GT:GENE CIRG_01206 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 809 SQ:AASEQ MSRGGTADFDTLWNVLASSMSEIHTKNASSLSFEEIYRSAYKAVMKKQGLVLYNKVIEFERTLLRDNLRKKITDLITPLLLSNTELANAMEQENERRVVGERFLSKIRDVWEDYQLCMGMIADVLMYMDKSVVAEHRSPSLYVASMCSFRDIVLRLGLEMDSQASVASVLQSTILFLIQLEREGIIIDRPLIRHCIYMLEGLYETEEEDESTKLYITSFEPAFLDSSRGFYETEGQKLLSTTDAPSFCKRAVTRIREEQERCHHTLSISTEPKIMWVIDEFLLKQNIPEIIKMEGSGVKEMLDNDRLADLAIIYDLISRIDLQKTALTQEVQARIIELGNQINKAAKEYLQGPQPTSNGGQAQSNGAKAPEEQKSPASLQTAAAIKWVDDVLQLKKRFDHVWENAFRKDQGMQASLTKSFSDFINVNPRSAEYLSLFFDENLKKGIKGKSEEEVDILLENGITLLRYIRDKDLFETYYKKHLSRRLLMKRSVSMDAERQMISKMKMEVGNTFTQRLESMFKDMAISEDLSSSYKDHISQSNGPDPKRIELEMSILTSTMWPMEIMGKDSASHAPCNFPKNIDLLKQSFESFYLGKHSGRKLTWQAGMGSADIRATWVRPNGKTERHDLNVSTYAMIILLLFNDLPASESLTFEEIQARTNIPTHDLIRNLQSLAVAPKTRVLKKDPMSKEVKPTDRFYFNEKFQSKFTKIKIGVVSSSGNKVETKDERSETEKKMNDERGGSVEAAIVRIMKQRKRLAHSQLVNEVISQLASRFVPNVDMIKKKIESLIDREYLERLPDVEPASYGYIA BL:SWS:NREP 1 BL:SWS:REP 10->809|CUL3_MOUSE|e-137|41.7|720/768| SEG 200->210|eglyeteeede| BL:PDB:NREP 1 BL:PDB:REP 13->809|2hyeC|1e-96|36.1|693/719| RP:PDB:NREP 1 RP:PDB:REP 429->807|3dqvC|3e-73|27.8|352/363| RP:PFM:NREP 2 RP:PFM:REP 27->695|PF00888|2e-97|42.3|574/578|Cullin| RP:PFM:REP 735->799|PF10557|7e-14|63.1|65/68|Cullin_Nedd8| HM:PFM:NREP 2 HM:PFM:REP 13->703|PF00888|8.5e-132|33.0|587/589|Cullin| HM:PFM:REP 736->797|PF10557|7.5e-31|61.3|62/68|Cullin_Nedd8| GO:PFM:NREP 6 GO:PFM GO:0006511|"GO:ubiquitin-dependent protein catabolic process"|PF00888|IPR001373| GO:PFM GO:0031461|"GO:cullin-RING ubiquitin ligase complex"|PF00888|IPR001373| GO:PFM GO:0031625|"GO:ubiquitin protein ligase binding"|PF00888|IPR001373| GO:PFM GO:0006511|"GO:ubiquitin-dependent protein catabolic process"|PF10557|IPR019559| GO:PFM GO:0031461|"GO:cullin-RING ubiquitin ligase complex"|PF10557|IPR019559| GO:PFM GO:0031625|"GO:ubiquitin protein ligase binding"|PF10557|IPR019559| RP:SCP:NREP 3 RP:SCP:REP 8->425|2hyeC2|2e-58|27.9|341/347|a.118.17.1| RP:SCP:REP 429->715|2hyeC3|2e-67|41.3|269/273|e.40.1.1| RP:SCP:REP 721->809|1ldjA1|7e-27|51.1|88/90|a.4.5.34| HM:SCP:REP 9->431|1ldjA2|4.8e-90|34.0|356/0|a.118.17.1|1/1|Cullin repeat-like| HM:SCP:REP 423->714|1ldjA3|5.4e-87|47.8|270/0|e.40.1.1|1/1|Cullin homology domain| HM:SCP:REP 717->809|1iuyA_|5.9e-26|52.2|92/0|a.4.5.34|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 1056 OP:NHOMOORG 193 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -212564-523-44433323333333333334333333334333333333333333333333323222-4223332222224333333-46334463333343556-4B898A8A996676466BB6B6P*82A9B55658667655655964A477667FN66596B689D9753333i3333377A93743454336 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 763 STR:RPRED 94.3 SQ:SECSTR #########HHHHHHHHHHHHTTcTTccccccHHHHHHHHHHHccTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTT################TcccccTTHHHHHHHHHHHHHHHHHHHHHHHTHHHHTTTTTccccccHHHHHHHHHHHTTTT###TTTcccTTHHHHHHHHHHHHHTTTTTccccHHHHHHHHHHHHHTccccccccccTcHHHHTHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHTHHHHTTTccTTTHHHHHHHHHHHHTTTccHHHHHHH#TTHHHHHTTTcHHHHHHHHHHHHHcTTHHHHHHHHHHHHHHHHHHHH######HHHHHHHHHHHTTcGGGcHccGGGTTT###########HHHHHHHHHHHHHHHHHTTTTTcHHHHHHHHHHHHHHHTTccccTTHHHHHHHHHcccHHHcccHHHHHHHHHHHHHHGGGcccTHHHHHHHHHHHHHHHHTTccccHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHHHHHHHcccccGccTTcGGGcccccccTTTcccccccccccccccccccHHHHHHHHHHHHHHHTTcTTccccccTGTcEEEEEccTEEEEccccEEEEEEEHHHHHHHHTcTTcTTTccEEHHHHHHHHcccHHHHHHHHHHHHccTTcccEEEcccGGGccTTcEEEEcTTccccccccccEEEEccccccTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEcHHHHHHHHHHHTTTTcccccHHHHHHHHHHHHTTcEEEccccccccEEEcc PSIPRED ccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHccccccccHHHHccHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEcccccccccccccccccccEEccHHHHHHHHHHHHHHHHcccccEEEEEEccEEEEEEEEEccccccccEEEEEEcHHHHHHHHHHccccccccEEHHHHHHHccccHHHHHHHHHHHHHHcccccccccccccccccccEEEEccccccccEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccEEEcccccccEEEEcc //