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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01221
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  20/68 : Bacteria  359/915 : Eukaryota  111/199 : Viruses  1/175   --->[See Alignment]
c.1.15
:557 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   150->402 1qtwA PDBj 2e-54 42.0 %
:RPS:PDB   114->390 1dxiA PDBj 9e-26 12.1 %
:RPS:SCOP  122->402 1qtwA  c.1.15.1 * 4e-38 40.3 %
:HMM:SCOP  121->399 1qtwA_ c.1.15.1 * 5e-77 37.0 %
:RPS:PFM   212->360 PF01261 * AP_endonuc_2 6e-07 38.8 %
:HMM:PFM   143->358 PF01261 * AP_endonuc_2 1.1e-27 23.6 195/211  
:BLT:SWISS 124->386 APN1_YEAST 9e-73 47.5 %
:PROS 296->303|PS00730|AP_NUCLEASE_F2_2
:PROS 336->352|PS00731|AP_NUCLEASE_F2_3
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01223 GT:GENE CIRG_01221 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 557 SQ:AASEQ MPPRVTRAASRRSDTRAAVANGIVSPGRKKREREEAGSSPPFVSKRPREAAIDSGKAISVSPVSEAGVSEEPVIPIKVEKDVVEEKVKATVQKTRKRKTKGKEEQAEDMKPLAPRTEGLRMFIGAHVSASKGIHNAVTNSLHIGGNAFALFLKSQRKWDNPPMQDDHRDQFRTLCSEHKYDASKYVLPHGSYLVNLAQEDPTKANQAYNSFIDDLRRCEELGIKLYNFHPGASNQSTLESALSRLAKALIAALDATKTVIPVLETTCGHGTSIGGPLSHFKSLLALIPESYHSRLGICLDTCHTFAAGYDLRTQDTWNAFMKEFDETVGLKFLRALHINDSKTPLGSNRDLHANIGTGFLGLRAFHNVMNDKRLEGLPMILETPIDRPAESVKAEQKEEALASECAHDELDVSEAESPSKKRTKASTSSKVKKIRTTKAKTKTKPAMIEDKSVWVREIKLLESLIGMDPESEKFKSLEAELSEQGREEREKQQALYDKKKEKEKAKEEKQKDIRVMFGSTKKKGSKAKTAGKRGRKGGRAESSDEESALSSENDEST BL:SWS:NREP 1 BL:SWS:REP 124->386|APN1_YEAST|9e-73|47.5|261/367| PROS 296->303|PS00730|AP_NUCLEASE_F2_2|PDOC00599| PROS 336->352|PS00731|AP_NUCLEASE_F2_3|PDOC00599| SEG 4->20|rvtraasrrsdtraava| SEG 77->105|kvekdvveekvkatvqktrkrktkgkeeq| SEG 417->444|spskkrtkastsskvkkirttkaktktk| SEG 498->511|kkkekekakeekqk| SEG 518->556|gstkkkgskaktagkrgrkggraessdeesalssendes| BL:PDB:NREP 1 BL:PDB:REP 150->402|1qtwA|2e-54|42.0|250/285| RP:PDB:NREP 1 RP:PDB:REP 114->390|1dxiA|9e-26|12.1|264/388| RP:PFM:NREP 1 RP:PFM:REP 212->360|PF01261|6e-07|38.8|129/200|AP_endonuc_2| HM:PFM:NREP 1 HM:PFM:REP 143->358|PF01261|1.1e-27|23.6|195/211|AP_endonuc_2| RP:SCP:NREP 1 RP:SCP:REP 122->402|1qtwA|4e-38|40.3|278/285|c.1.15.1| HM:SCP:REP 121->399|1qtwA_|5e-77|37.0|276/0|c.1.15.1|1/1|Xylose isomerase-like| OP:NHOMO 501 OP:NHOMOORG 491 OP:PATTERN ------------------------11111111-1---------111111------------111--11 1111-----------11----111-1------11111-111-------------------111-1--1111----1111111-1-1111111-1----------------111111111111111111111111-111111---11----------------------------------------1111-111111111111111111111111111111111111111122111111111111111111111-1-11-----11--111-1----------------------------------------------------1-1-------1-1-1------1---11111---1---1111----1-121------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111111--1111-1111111111111-1-111111---------------11111--111---------------1----1-11-111---11-11111111111111111111111-111111111111111111111111111111111111111111111111111--111111111111------------------111---1----1------------------------------------------11111111111111----------------1-----------------11-121-111111111111111111111111111111-1 111111--1-----11121111111-111111111111111111111111111111111111111111-1111111111111111111-12111111112--1---11-1311111------------------------------------------1---1111-----1111---------1----1--------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 295 STR:RPRED 53.0 SQ:SECSTR #################################################################################################################HHTccccccccccccccccHHHHHHHHHHHTccEEEEEHHHHcccccHHHHHHHHHHHHHHHHHHTccccEEEccccGccccTTcccHHHHHHHHHHHHHHHHHHHTTTccEEEEcccccEEcccHHHHHHHHHHHHHHHHTTccccEEEcccccccccEEEccccHHHHHHHHTTcccGGTcccccHHHHHTTTccHHHHHHHHcHHHHHHHHTTTTccccEEEcccccccccccccccTTcccHHHHHHHHHHHHHTTcccccEEEcccccTTcccccTTccHHHHHHHHHHH##################################################################################################################################################### PSIPRED cccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHcccccHHHHHHHHccHHHHcccccccccccccccccccccccHHHHHHHccccHHHHccccccccHHHHccccEEcccccccccEEEEEEEcccccHHHHHHHHHHccccEEEEEcccccccccccccHHHHHHHHHHHHHccccccccEEEEcccEEccccccHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccHHHHHHHHHHHHHccccccEEEEEEHHHHHHccccccHHHHHHHHHHHHHHHcHHHHEEEEEcccccccccccccccccccccccHHHHHHHHccHHHcccEEEEEccccccHHHHcHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccHHHHHHHHHccHHcccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEccccccccccccccccccccccccccHHHHHHcccccccc //