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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01227
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  54/199 : Viruses  0/175   --->[See Alignment]
c.23.5g.38.1g.80.1
:589 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   19->57 1ajyA PDBj 2e-04 34.2 %
:RPS:PDB   19->70 1ajyA PDBj 1e-08 27.5 %
:RPS:SCOP  13->73 1wffA  g.80.1.1 * 8e-10 16.4 %
:RPS:SCOP  152->269 1tllA2  c.23.5.2 * 3e-04 16.5 %
:HMM:SCOP  13->55 1aw6A_ g.38.1.1 * 7.8e-09 37.2 %
:RPS:PFM   21->57 PF00172 * Zn_clus 2e-06 48.6 %
:RPS:PFM   131->274 PF04082 * Fungal_trans 1e-07 33.3 %
:HMM:PFM   131->360 PF04082 * Fungal_trans 1.1e-16 23.3 223/260  
:HMM:PFM   22->57 PF00172 * Zn_clus 1.5e-10 44.4 36/40  
:BLT:SWISS 23->66 LYS14_YEAST 3e-06 36.4 %
:BLT:SWISS 208->302 GAL4_YEAST 2e-04 31.5 %
:PROS 22->50|PS00463|ZN2_CY6_FUNGAL_1
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01229 GT:GENE CIRG_01227 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 589 SQ:AASEQ MRSSSLPSVCSSRQTVHRVSLACMQCRSRHMRCDAKQPECSRCQLDKRRCTYVKSKRGGRRRATSADSPQGESTVFSEPTSVSPEWKKYIDTIREPSQEIVFSEPCSVTSDSQATPSMIDDPVASPFDNLLDLYYSTFHAAHAFVLPKQNLLDRLEKDPLSFEALVLVMRYIGSLFNPSTSSASLERKVQRALAPIRSREYFLTGYHVQCLLLYSCAAYWCNKTETGLRLLDETIQLAIELGMELESYAIQHGEGDPVLEESWRRTWWQIYVTEAHITGTTRSFPTKTGGLHITTALPCEDHNYQSGTIPPPRTLYEYDMREFLMAEGDAEFSSIAELIGLTRTLNMVLSGRKTGNLSVTRTICAEVDIAISAWCALLPASKKNVKRSDGTVDEQLFNANILIHTCIVDLHRELSDLAYSPIESVSRCAPPSPAERLHVFPSNETHGHTLRVLSSIEKVGRLLNVVTAFDTCTPFLISMIANTTVAHLSACKHLFRGRRLQMEREKIRLSMAALKSLSEFWPLGRRTYTELGIIARESLSLADREISPWVASMGLPPVMCRNIGADLGGALDTCNPFDDSASCEFLMNV BL:SWS:NREP 2 BL:SWS:REP 23->66|LYS14_YEAST|3e-06|36.4|44/790| BL:SWS:REP 208->302|GAL4_YEAST|2e-04|31.5|92/881| PROS 22->50|PS00463|ZN2_CY6_FUNGAL_1|PDOC00378| SEG 3->12|ssslpsvcss| BL:PDB:NREP 1 BL:PDB:REP 19->57|1ajyA|2e-04|34.2|38/71| RP:PDB:NREP 1 RP:PDB:REP 19->70|1ajyA|1e-08|27.5|51/71| RP:PFM:NREP 2 RP:PFM:REP 21->57|PF00172|2e-06|48.6|37/38|Zn_clus| RP:PFM:REP 131->274|PF04082|1e-07|33.3|138/231|Fungal_trans| HM:PFM:NREP 2 HM:PFM:REP 131->360|PF04082|1.1e-16|23.3|223/260|Fungal_trans| HM:PFM:REP 22->57|PF00172|1.5e-10|44.4|36/40|Zn_clus| GO:PFM:NREP 8 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00172|IPR001138| GO:PFM GO:0005634|"GO:nucleus"|PF00172|IPR001138| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00172|IPR001138| GO:PFM GO:0008270|"GO:zinc ion binding"|PF00172|IPR001138| GO:PFM GO:0003677|"GO:DNA binding"|PF04082|IPR007219| GO:PFM GO:0005634|"GO:nucleus"|PF04082|IPR007219| GO:PFM GO:0006350|"GO:transcription"|PF04082|IPR007219| GO:PFM GO:0008270|"GO:zinc ion binding"|PF04082|IPR007219| RP:SCP:NREP 2 RP:SCP:REP 13->73|1wffA|8e-10|16.4|61/85|g.80.1.1| RP:SCP:REP 152->269|1tllA2|3e-04|16.5|115/175|c.23.5.2| HM:SCP:REP 13->55|1aw6A_|7.8e-09|37.2|43/43|g.38.1.1|1/1|Zn2/Cys6 DNA-binding domain| OP:NHOMO 146 OP:NHOMOORG 54 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------11234564656411333322232222223222246549522221111-----------11------111--------1------------------------------------------------------------------------------------------------2--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 54 STR:RPRED 9.2 SQ:SECSTR ################cccccccHHHHHTTcccccccccccHHHHTTcccccccccccccccHHHHHHHH####################################################################################################################################################################################################################################################################################################################################################################################################################################################################################################################################### PSIPRED cccccccccccccccccccccccHHHHHHHcccccccccccHHHHccccEEEcccccccccccccccccccccccccccHHHHHcccccccHHHHHHcccccccccccccccccccHHHHcccccccccccccccccccccccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHcccccccccccccccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHccHHHHHHccccccccHHHHHHHHHHHHHHHHHHcHHHHcccHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHcccccccccccccccccccccccccccccHHHHHHHcc //