[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01232
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  22/915 : Eukaryota  143/199 : Viruses  0/175   --->[See Alignment]
b.82.2
:388 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   221->328 3i3qB PDBj 1e-08 34.3 %
:RPS:PDB   183->337 3bkzA PDBj 3e-15 23.2 %
:RPS:SCOP  212->337 2iuwA1  b.82.2.10 * 7e-15 26.2 %
:HMM:SCOP  111->375 2fdiA1 b.82.2.10 * 6e-42 40.1 %
:HMM:PFM   291->316 PF06888 * Put_Phosphatase 0.00015 38.5 26/234  
:BLT:SWISS 202->373 ALKBH_SCHPO 5e-41 53.1 %
:PROS 289->299|PS00639|THIOL_PROTEASE_HIS
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01234 GT:GENE CIRG_01232 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 388 SQ:AASEQ MGPTSFPFNQVPERLRMVPAEKLSPYERAPAAVRELYSECRRLSALQIDSHPQILDFQGLNKDRLPDGIVLKECIPPSSLELAFDEFMGSNSWRKDLRDGRDGACVYGIRQVPGLRILPSLLPPAVQTELLSRLLHRDLSDERHQTNLHLHYDVSYPSPSSDANGASALKGTQQEACWSTNSSFFRDDPTRTFSPKDATVHRPLSIQAALNSKLRWITLGGQYNWTTKEYPPGPPPAFPSDISTLLHSIFPETTAEAAIVNLYSPGDTLNPHRDVSEECDTGLISISLGCHALFLVGHGNGDSCAVIRLRSGDAVYMTGASRFAWHAVPKIIPSTCPDWLKTWPGGGDVPDEDSQRWWGWMAGKRVNLNVRQMFQSPPTNPAALGEND BL:SWS:NREP 1 BL:SWS:REP 202->373|ALKBH_SCHPO|5e-41|53.1|162/297| PROS 289->299|PS00639|THIOL_PROTEASE_HIS|PDOC00126| SEG 129->144|ellsrllhrdlsderh| BL:PDB:NREP 1 BL:PDB:REP 221->328|3i3qB|1e-08|34.3|108/203| RP:PDB:NREP 1 RP:PDB:REP 183->337|3bkzA|3e-15|23.2|155/201| HM:PFM:NREP 1 HM:PFM:REP 291->316|PF06888|0.00015|38.5|26/234|Put_Phosphatase| RP:SCP:NREP 1 RP:SCP:REP 212->337|2iuwA1|7e-15|26.2|126/202|b.82.2.10| HM:SCP:REP 111->375|2fdiA1|6e-42|40.1|192/0|b.82.2.10|1/1|Clavaminate synthase-like| OP:NHOMO 187 OP:NHOMOORG 165 OP:PATTERN -------------------------------------------------------------------- ------11111--1-----------------------1--------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-------1-------------------------1--1----1-------1---1111----------1-1-----------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----11--211-11111221111111-111111111111111111122111111111111111-----------------------11-1-111111111-1-22---1121111-1111111111121181-111111111--1111-11--11111---11111-1111--11--1-4-111111122111-11111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 169 STR:RPRED 43.6 SQ:SECSTR ######################################################################################################################################################################################HHHHHHHHccccccccTTccccccEEEEEEccEEEEccccEEEEcccTTTcccccccHHHHHHHHHHHHHTcccEEEEEEEcTTccEEEEccccccTTccEEEEEEEccEEEEEccccTTcccEEEEcTTcEEEEcGGGTTccEEEccccccccT######################TTcccEEEEEEEcc############### DISOP:02AL 9-13,17-18| PSIPRED cccccccHHHccHHHHccccccccccccccHHHHHHHHHHHcccHHHHcccccEEEEccccccccccccHHHHcccHHHHHHHHHHHcccccccHHHHHHcccccEEEEccccEEEEEcccccHHHHHHHHHHHHHHHcccccccccccHHHccccccccccHHcccccccHHHHHHHHHHHHHHccccccccccccccccccHHHHHHcccccEEEEcccEEEEccccccccccccccHHHHHHHHHHcccccccEEEEEEccccccccccccccccccccEEEEEccccEEEEEcccccccEEEEEcccccEEEEccHHHHHHHcccccccccccccccccccccccccccHHHHHHHcccccEEEEEEEEcccccccHHHccccc //