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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01235
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  49/199 : Viruses  0/175   --->[See Alignment]
:492 amino acids
:PSIPRED
:HMM:PFM   331->392 PF05758 * Ycf1 0.00085 33.9 62/929  
:BLT:SWISS 111->197 RAE1D_MOUSE 6e-04 30.1 %
:TM
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01237 GT:GENE CIRG_01235 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 492 SQ:AASEQ MLDENLPTFYIKPSTERPKHQSTYYFCQGGEDPSPAYSVRHLDPDLPASKNRYAVALYDSFCPDILYGEVLLIPKWTQPSLSQEAIRQNNGVPPPPEPILPNEFIIQLYNPDQQVLVRYKPKSWNSPASWQFEMPQQTFRLPSGSSLDRTMSDPAASDITPKLRFNWQKDGKFSKDLTCYLSGKTVDVDDARKRSKEPDITVSIFKGLKEVTLYEPNLYRVEMEDHKGLEVVLLLGAVVIRDVYFGHIKTSFHITDPPNPTTLAAPKITPPKVSVNGTAPQIKGQSGGPQPNQQGPHSNPPRQTTLPVREARPPPADPRTQWEIDAETSRLKQQAEAEARERRRKEKEAEKQTRKLLEAEERERRRREAQVKEETERLKKIYGKEDKKLRKQVSGPPSASRPPAPLPPGPPQFNNAHYLTSTPAPSWFATPARPQTTQPTPQFLAPRPPASTAGGLRPPQPQLKERRSIFGFRLGDSRDSGNGLSKKRSSMF BL:SWS:NREP 1 BL:SWS:REP 111->197|RAE1D_MOUSE|6e-04|30.1|83/100| COIL:NAA 30 COIL:NSEG 1 COIL:REGION 329->358| TM:NTM 1 TM:REGION 225->247| SEG 93->101|ppppepilp| SEG 228->239|glevvlllgavv| SEG 284->301|gqsggpqpnqqgphsnpp| SEG 332->352|kqqaeaearerrrkekeaekq| SEG 358->369|eaeererrrrea| SEG 394->411|sgppsasrppaplppgpp| SEG 434->442|pqttqptpq| HM:PFM:NREP 1 HM:PFM:REP 331->392|PF05758|0.00085|33.9|62/929|Ycf1| OP:NHOMO 49 OP:NHOMOORG 49 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------11111111111111111111111111111111111111111111111------------------------------1------------------------------------------------------------------------------------------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PSIPRED cccccccEEEEEcccccccccEEEEEEcccccccHHHHHHccccccccccccEEEEEcccccccEEEEEEEEccccccccccHHHHHHHccccccccccccccEEEEEEcccccEEEEEccccccccccEEEEcccHHcccccccccHHHcccccHHHcccEEEEEEEccccccccEEEEEEccEEcccccccccccccEEEEEEEcccEEEEEcccEEEEEEccccccEEEEEEcHHHHHHHHcccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccHHHccc //