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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01245
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  179/199 : Viruses  0/175   --->[See Alignment]
d.110.4
:1019 amino acids
:PSIPRED
:RPS:SCOP  607->689 1gw5S  d.110.4.2 * 2e-04 15.7 %
:RPS:PFM   83->304 PF06070 * Herpes_UL32 2e-04 24.3 %
:RPS:PFM   540->717,783->840 PF05346 * DUF747 3e-64 64.0 %
:HMM:PFM   541->896 PF05346 * DUF747 3.5e-115 54.2 301/330  
:BLT:SWISS 396->444,548->717,783->827 TAPT1_SCHPO 1e-49 56.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01247 GT:GENE CIRG_01245 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 1019 SQ:AASEQ MKNDRGAGGTVEQQGRAWNRDPGRKLSSTVMDSDRGAERHINGLGIKAGGEDAKGVELGRADMQNAPVRGREEFPPLSDDKLQPLTRVGENASSDATPNLRGKSTESIAENTTSNGAASPPERPAVQIENSAAVGPEPPTTTTTTTASTKHPLRDSVGSPSSRPRSQTLKLSSEKIRELTSAPDSLCLRSVPADIDHRASRVTSVGERGPVQVPWAESEDGDRFNTDRDNTNMGLALNGKGATQNGSVRRESGSLRQRKPGTSKQRYAEQASDHSVQSSQEQHSFGRQQSQTARMASTPSASSRRLHSPFGVDRQSNNCMSKSRTDRRAPGRLNLEDPVRSGQSAAEPPSPVPAAIPLPPFSIPTYLQLELSSERPSPLYIHQSRTKDFPYESSRVKLERLQNFLLLPPSVEQVLLFGTLACLDSWLYSFTILPLRFCKSILILFQSWAVNLGLEAQYISSFIVQGLGRVWRRRKRSRSTDKRCKPGCDGDYDSLRVKEATSSAISSPVDDNPFQGQDVKSRMDDIQRRMHRHRRSKSVPSALQPNDKADILKGLLMIFTCTILLYFDASRMYHWIRGQAAIKLYVIYNVLEVGDRLFSAIGQDVLECLFSREALERGPDGRSKVLRPFWLFILALFYTVIHSTALFYQVMTLNVAVNSYSNALITLLLSNQFVEIKSTVFKKFEKENLFQLTCADVVERFQLWLMLIIIASRNFVETGAVTFGNALAPFSKPSPTPSTNSTPPASPPMSATSILPQSFTLFPSSIFLSLSSVNSFLPTIGHVLGPFLVVLGSEMLVDCYTHAYINKFNNIRPSIYGRFLDILTKDYYTNAFADQNLNRRTILETVMSHTMPSPATFIPVFTVILVLLLYVTLLLVKLILGMTLLSFSRARYKRMKLSEREMLHQQQKQTSSQGASILASQTQLLSPPPDSAPPSFSIYANSKPDPTGDTVEGSHRVGGWGAVEVGEGRRRWIYADDPEALRKLKEREERDANKAAKSVGGLHGIGNIRRYEMVAKRIW BL:SWS:NREP 1 BL:SWS:REP 396->444,548->717,783->827|TAPT1_SCHPO|1e-49|56.5|264/649| TM:NTM 6 TM:REGION 348->369| TM:REGION 429->451| TM:REGION 549->571| TM:REGION 630->652| TM:REGION 765->787| TM:REGION 860->882| SEG 140->146|ttttttt| SEG 345->360|aaeppspvpaaiplpp| SEG 469->483|rvwrrrkrsrstdkr| SEG 728->753|apfskpsptpstnstppasppmsats| SEG 758->777|sftlfpssiflslssvnsfl| SEG 860->885|vftvilvlllyvtlllvklilgmtll| SEG 926->937|spppdsappsfs| SEG 956->972|rvggwgavevgegrrrw| SEG 981->990|lrklkereer| RP:PFM:NREP 2 RP:PFM:REP 83->304|PF06070|2e-04|24.3|218/723|Herpes_UL32| RP:PFM:REP 540->717,783->840|PF05346|3e-64|64.0|236/314|DUF747| HM:PFM:NREP 1 HM:PFM:REP 541->896|PF05346|3.5e-115|54.2|301/330|DUF747| GO:PFM:NREP 1 GO:PFM GO:0005198|"GO:structural molecule activity"|PF06070|IPR010340| RP:SCP:NREP 1 RP:SCP:REP 607->689|1gw5S|2e-04|15.7|83/142|d.110.4.2| OP:NHOMO 200 OP:NHOMOORG 179 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 11-1111-----11111111111111111111111111111111111111111111111111111111-11111111-1111111111---111111111111111-1112132231111111111111351-31311111111-1111-1111121111111111-11--1111-1112111111112111111111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PSIPRED ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccEEEcccccccEEEEccccccccccHHHcHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEcccHHHHHHHHHccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHccccHHccccccHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccHHHccccHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccEEEEcccccccccccccHHHHHccccccccccccccccccccccccEEEEEEEEcccc //