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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01246
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  18/68 : Bacteria  301/915 : Eukaryota  170/199 : Viruses  0/175   --->[See Alignment]
b.69.4c.56.5
:960 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   46->321 1p22A PDBj 7e-09 24.9 %
:BLT:PDB   406->797 3dljB PDBj 2e-49 35.7 %
:BLT:PDB   888->932 2zogA PDBj 2e-04 40.0 %
:RPS:PDB   13->322 3ei3A PDBj 3e-18 7.3 %
:RPS:PDB   406->800 3dljB PDBj 2e-34 33.2 %
:RPS:PDB   888->951 3dljB PDBj 2e-05 15.6 %
:RPS:SCOP  44->390 1k8kC  b.69.4.1 * 1e-15 11.7 %
:RPS:SCOP  418->597 1vgyA1  c.56.5.4 * 8e-29 23.1 %
:HMM:SCOP  67->413 1erjA_ b.69.4.1 * 5.9e-41 24.5 %
:HMM:SCOP  393->953 1lfwA1 c.56.5.4 * 3.3e-47 29.9 %
:RPS:PFM   479->597,868->947 PF01546 * Peptidase_M20 9e-11 35.9 %
:HMM:PFM   479->949 PF01546 * Peptidase_M20 4.8e-23 29.3 164/171  
:HMM:PFM   83->118 PF00400 * WD40 5.1e-06 27.8 36/39  
:HMM:PFM   220->261 PF00400 * WD40 1.4e-07 31.4 35/39  
:BLT:SWISS 45->784,888->951 YB9X_YEAST e-105 35.5 %
:PROS 248->262|PS00678|WD_REPEATS_1
:PROS 478->487|PS00758|ARGE_DAPE_CPG2_1
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01248 GT:GENE CIRG_01246 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 960 SQ:AASEQ MDSSQCHEPAVGVSTDGDDGIATTQPRQSISSNTANLKNECAIGHRVHAVRSVLALVVDEECVFAGLQGGDIVAWSLDTYELVLSVKAHEESVLGLYLSDDRNLLFSSGGDSVVNVWSTSTFERLYSIYTHHDVGDIFTVAYSSELKTVYCGGQNTSLQWYNLLRDAHPPPQIATHPSCRTHKFFDSRGPGGIAPPARTDNQSLNALYDGQTLTFKRDQHKLFAHNGYVYCMLLVRGILECQSGGEVLFTGSGDGSVKLWELNQGTNVAPTEIASLQNGSESVLSIAVDGPFLYCGLTGGAINIWNLDSRQIIKTITSHTGDLWAIDIIKGIIVSGDGDGIVKKFNSRFEEIGSWAAHDGTMLASAAGVVKDRWIYATGGNDNSVAIWDLTEHPVDSHEIPATSNDELVNALAKFVGFKTISARPKFSGECNQGAAFLRRHCIYLGAQTNILTTGQNTNPIVFAKFPATSQNALDRTVLFYGHYDVVGAEANQAKWNTDPFQLTSLNGFLYGRGVSDNKGPILAALYAAAELTQRKELTCNVVFLIEGEEESGSQGFAETIKENKDLIGPVDWILLANSYWLDDHIPCLTYGLRGVIHANLIVASHHPDLHSGIDGSSLLDEPLKDLTMLLSTIVGPKGKINLPGFQDPVLPLTPIEKQRYDAIAEALLPHHPEIEDVESFTASLMHRWREPSLTIHSVEIPGCKSSTTTISRKAKATLSIRLVPNQNADKVAEDLIDYAQTQFADLDSQNILTVEITGKADPWLGDPGNELFETLSRAVTAVWSASTESRKYNNYPPPIPTRHLSNSGLPRTNSSDSLASTSKIERILASSSSVPNHKSGRKAKSSHLSPIPTSSTLTTDPTDPNQPSHSQEHETSENHRKTAPQLIKPIYIREGGSIPTIRFLEKEFNAPAAHLPCGQASDNAHLSNERLRVENLYRSREIFRRVFRELGGSLPAHQE BL:SWS:NREP 1 BL:SWS:REP 45->784,888->951|YB9X_YEAST|e-105|35.5|786/878| PROS 248->262|PS00678|WD_REPEATS_1|PDOC00574| PROS 478->487|PS00758|ARGE_DAPE_CPG2_1|PDOC00613| SEG 326->343|idiikgiivsgdgdgivk| SEG 846->865|sshlspiptsstlttdptdp| BL:PDB:NREP 3 BL:PDB:REP 46->321|1p22A|7e-09|24.9|249/402| BL:PDB:REP 406->797|3dljB|2e-49|35.7|381/467| BL:PDB:REP 888->932|2zogA|2e-04|40.0|45/478| RP:PDB:NREP 3 RP:PDB:REP 13->322|3ei3A|3e-18|7.3|262/1105| RP:PDB:REP 406->800|3dljB|2e-34|33.2|388/467| RP:PDB:REP 888->951|3dljB|2e-05|15.6|63/467| RP:PFM:NREP 1 RP:PFM:REP 479->597,868->947|PF01546|9e-11|35.9|194/308|Peptidase_M20| HM:PFM:NREP 3 HM:PFM:REP 479->949|PF01546|4.8e-23|29.3|164/171|Peptidase_M20| HM:PFM:REP 83->118|PF00400|5.1e-06|27.8|36/39|WD40| HM:PFM:REP 220->261|PF00400|1.4e-07|31.4|35/39|WD40| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF01546|IPR002933| GO:PFM GO:0016787|"GO:hydrolase activity"|PF01546|IPR002933| RP:SCP:NREP 2 RP:SCP:REP 44->390|1k8kC|1e-15|11.7|326/354|b.69.4.1| RP:SCP:REP 418->597|1vgyA1|8e-29|23.1|169/262|c.56.5.4| HM:SCP:REP 67->413|1erjA_|5.9e-41|24.5|278/0|b.69.4.1|1/1|WD40 repeat-like| HM:SCP:REP 393->953|1lfwA1|3.3e-47|29.9|261/0|c.56.5.4|1/1|Zn-dependent exopeptidases| OP:NHOMO 815 OP:NHOMOORG 489 OP:PATTERN ------1211111112---------------------------1-------1---1--1-11----11 11312111111111-11----1--1------11111121111---11-11111111111121111-122211111111----1-----1111-1111--11111211111-------11111111-----------43344---113-5--11--------------5453------------31222---1-----------------21----------21--------11--------11---11-----1-1-21---------211--111---111111111111111111111-------------11111-1111----------------------------2-----------1---------1-1----11111112321111111111111111111-1121121212--311311122111111--1411111221--------2111----------------1----1--1------------------12222221----22211111--21-------11---1-1212--2------------------------1--1----------------1-11112--1------------------------------1--1----------------------------1---1-----33------------------------------------221--------------------------------------------1-11-1111----2--------------------------------1--------1-1------------------------1-11-11-11------1----------------------------------------------11------11 -----22-831-1122222222322232222221222222223222342422322223222232222212222222212222222211-25222252222212354-13-22722242122222332424V2-344222222223-221-221443333112-2111111-221-312-----11-12-2--11----1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 903 STR:RPRED 94.1 SQ:SECSTR ccccEEEcTTcTEEEEEEEccTTccccccEEEEEEEEETTEEEEEEEEEEcccEEEEEEETTEEEEEETTEEEEEEEcTTccEEEEEEEcccccEEEEEEETTEEEEEEccccEEEEEEETTTTEEEEEEEccccccEEEEEEEETTEEEEEETTcEEEEEEEHccTTTcccHHHHccccHHHHHHHHHHHHccccccccTTcccTTGGGcEEEEEEEEccccEEEEEEcccccccEEcccccEEEEEEEEETTccEEEEEEEcHTTcEcHHHHHHHHHHHHHHHHccTcccHHHHHcEEcEccccEEEHHHHHGGGGccHHEEcEEcccccEEEEEETTccccccccHHHHHHHHHHTTcEEccEEEEEccHHHHccTTcccTTTcccccTTccccccTTcTTcHHHHHHHHHHHTcccccccHHHHHHHHHHHHHHHHHHHHTTcEEEEEcccEEcccEEEEEEcccTTccEccEEEEEEEcccccccGGGGTccccTTccEEETTEEEcTTTTTTHHHHHHHHHHHHHHHTTcccccEEEEEEEccGGGTcTTHHHHHHHTTTTTTTccEEEEcccccccccccEEEEEEcEEEEEEEEEEcccccEETTTTTcTccccHHHHHHHHHTTcccTTcccccTTTTTTcccccHHHHHHHHTcHHHHHHHTccccccccHHHHHHHHHTccEEEEEEEEcccccccccEEccEEEEEEEEEEcTTccHHHHHHHHHHHHHHHHHTTTcccEEEEEEEEEEccEEcccccGGGHHHHHHHHHHccccHHHHHHHHHHcccEHHHHHHHHTccccccccHHHHHHHHHHHH#########################################################cccEEEEEccccHHHHHHHHHTccEEcccccccTTccTTcTTcEEEHHHHHHHHHHHHHHHHHHHcHHTccGG DISOP:02AL 960-961| PSIPRED cccccccccEEEEEccccEEEEEEccccEEEEEcccccEEEEEEcccccEEEEEEEcccccEEEEEEcccEEEEEEccccEEEEEEEcccccEEEEEEcccccEEEEEEcccEEEEEEcccccEEEEEEccccccEEEEEEEcccccEEEEEEccccEEEEEcccccEEEEEEcccccEEEEEEEEcccccEEEEEEccccEEEEEcccccEEccccEEEEEEcccccEEEEEEEccccEEcccccEEEEEEcccEEEEEEcccccccccEEEEEEEcccEEEEEEEEcccEEEEEEccccEEEEEccccEEEEEEEcccccEEEEEEcccEEEEEEcccEEEEEEccccEEEEEEcccccEEEEEEEEcccccEEEEEEcccEEEEEEEccccccEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccEEEEEccccccEEEEEEEccccccccccEEEEEccEEEEEcccccccccccccEEEEEccEEEEEEEcccHHHHHHHHHHHHHHHHcccccccEEEEEccccccccccHHHHHHHHHHHcccccEEEEEccccccccccEEEEcccEEEEEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHccccccEEEcccccccccccHHHHHHHHHccHHHHHHccccccccccHHHHHHHHcccEEEEEEEEcccccccccEEccEEEEEEEEEEcccccHHHHHHHHHHHHHHHHcccccccEEEEEEccccccEEEccccHHHHHHHHHHHHHHccccEEEccccccccHHHHHcccccccccccccccccHHHHHHHHHccccHHHHHccHHHHHHHHccccccccEEcccccccccccccccHHHHHHHHHHHHccccEEEEccccHHHHHHHHHHHcccEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccc //