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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01251
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  59/199 : Viruses  1/175   --->[See Alignment]
a.118.24c.34.1d.211.1
:553 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   127->218 1qzuB PDBj 3e-11 35.6 %
:RPS:PDB   97->239 1e20A PDBj 8e-06 23.5 %
:RPS:SCOP  98->228 1p3y1  c.34.1.1 * 6e-09 17.2 %
:RPS:SCOP  423->523 1awcB  d.211.1.1 * 6e-06 26.7 %
:HMM:SCOP  74->258 1p3y1_ c.34.1.1 * 1.2e-19 29.0 %
:HMM:SCOP  360->494 2ajaA1 a.118.24.1 * 1.6e-06 25.2 %
:HMM:PFM   133->196 PF02441 * Flavoprotein 3.2e-12 31.2 64/122  
:BLT:SWISS 127->218 COAC_HUMAN 1e-10 35.6 %
:BLT:SWISS 356->540 YL696_MIMIV 9e-26 37.4 %
:REPEAT 5|351->378|381->407|418->443|446->472|476->502
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01253 GT:GENE CIRG_01251 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 553 SQ:AASEQ MAVDSKLRSDSHYFGAHDPQTQPTGVPAAMSSGSETGDMSNIGAGDNSGVPEMKQPVAHASGTMNVGQMRLLNSPSRHHNRILLSTNTPFSDTVMRSLLRDPDIELRLIADKDFNDGADGVDNLLYYPDIPQSETYRSRREWMNITAASLADWADVLIVAPVDAGTLGSMVSGLTTSLTLTILRGWDISKTILLVPKMMLLEWKSPITGRQLDQLRTFWPWVKILPPVLSRFEPPDSLVEVPWEGREMFYEEVRKGLGWPFNVNGAEDKIDSLDEAVIAGRMDKHLVKNDMDTATVLENRSESTVRRSSTPSRDPNAPVLPPELLTMIFEALGDWENIDSSWEWWRNCPDLPTNDYLPDALDGASRAGFIHVLEWWRKSGLPLRYTERALESASAEGQIAVLDWWKRVSESSAYSDPVPLKIGKSVLLAAQSGKTASLAWWDRSGIPYSHGESVARIASTHGHVPVLELWYRRKGSKIIFDNQVLVGATKNGHVDVLEWWRRSGLRVEFKTCDIEEALEDAVSGAEDRVRRWWERNGLNLGVGTSEWMKVKVL BL:SWS:NREP 2 BL:SWS:REP 127->218|COAC_HUMAN|1e-10|35.6|90/204| BL:SWS:REP 356->540|YL696_MIMIV|9e-26|37.4|174/313| NREPEAT 1 REPEAT 5|351->378|381->407|418->443|446->472|476->502| SEG 165->183|gtlgsmvsglttsltltil| BL:PDB:NREP 1 BL:PDB:REP 127->218|1qzuB|3e-11|35.6|90/155| RP:PDB:NREP 1 RP:PDB:REP 97->239|1e20A|8e-06|23.5|136/185| HM:PFM:NREP 1 HM:PFM:REP 133->196|PF02441|3.2e-12|31.2|64/122|Flavoprotein| RP:SCP:NREP 2 RP:SCP:REP 98->228|1p3y1|6e-09|17.2|122/171|c.34.1.1| RP:SCP:REP 423->523|1awcB|6e-06|26.7|101/153|d.211.1.1| HM:SCP:REP 74->258|1p3y1_|1.2e-19|29.0|176/183|c.34.1.1|1/1|Homo-oligomeric flavin-containing Cys decarboxylases, HFCD| HM:SCP:REP 360->494|2ajaA1|1.6e-06|25.2|119/0|a.118.24.1|1/1|Pseudo ankyrin repeat-like| OP:NHOMO 76 OP:NHOMOORG 60 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------11111111111121211111111111111111111111111111111---------------------------1111111----11----------------------------------------------------------------------------F---1------1--------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 136 STR:RPRED 24.6 SQ:SECSTR ################################################################################################HHHHT#TcEEEEEEcT####THHHHccGGGccTTcEEHHHHHcccTcccHHHHHHHHccEEEEEEEcHHHHHHHHTTccccHHHHHHHTccTTccEEEEEcccHHHHHcHHHHHHHHHHHHH##TcEEccccTTcTTcccccc########################################################################################################################################################################################################################################################################################################################## PSIPRED cccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccEEEEEEEHHHHHHHHHHHHHHHcccEEEEEEcHHHHHHHccHHHHHHccccccEEEEcccccccccccEEHHccccEEEEEcccHHHHHHHHHcccccHHHHHHHHccccccEEEEccccHHHHHcHHHHHHHHHHHHHcccEEEEcccHHHccccccHHHHHHHHHHHccccccccccEEEEcccccccccHHHHHHHccHHHHHHHccccEEEEcccEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHcccHHHHHHHHHccHHHHcccHHHHcccHHHHHHHHccHHHHHHHHHHcccccccHHHHHHHHHHccccHHHHHHHHccccEEEEcccccccHHHcccHHHHHHHHHcccEEEEEEccHHHHHHHHHccHHHHHHHHHHHcccEEEEcccccEEEEEc //