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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01269
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  76/199 : Viruses  0/175   --->[See Alignment]
c.15.1
:655 amino acids
:SECSTR
:PSIPRED
:RPS:PDB   120->190 2coeA PDBj 2e-04 18.3 %
:RPS:SCOP  136->183 1cdzA  c.15.1.1 * 3e-04 25.0 %
:HMM:SCOP  133->189 1cdzA_ c.15.1.1 * 4.1e-05 28.1 %
:RPS:PFM   255->382 PF08630 * Dfp1_Him1_M 4e-42 62.6 %
:RPS:PFM   592->638 PF07535 * zf-DBF 7e-18 70.2 %
:HMM:PFM   255->383 PF08630 * Dfp1_Him1_M 1.3e-46 51.6 124/125  
:HMM:PFM   591->639 PF07535 * zf-DBF 4.5e-26 63.3 49/49  
:HMM:PFM   135->196 PF00533 * BRCT 0.00035 31.4 51/78  
:BLT:SWISS 127->184,255->644 HIM1_SCHPO 1e-35 33.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01271 GT:GENE CIRG_01269 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 655 SQ:AASEQ MATILMPSPQTSIAMSNRRPPLADVPNATNSPHRGGLLATKRSRPLNSQADKGLAQPPLKKQILHRDGDPKSPRKFVCQPAETKLFARKNNAQPTAFERKLAAAREKQSSQSMSKPKKNATDSAESIRQWQKHYLKVFPTFVFYFDSVAEEVRHKWAKEITRLGGSDERFFSKYVTHVVTARPIPPDLETPQSFEASTANEARKAGASTDTVNPSLLENSTEVGQSQQGRARPRGALDKRTLDTDGRRELGGGVDILYRARQMNMKIWTLDKLQRFICAIRDHELPYTGHFPRNNATANKTKAESDLSAVLRNEKLHGPSDRDSLVGAKDLVPFKGPYIYIYDYFGKTRPVMIREYPKVARRQDGAWPQFRSAPLGKCPFVEEPQNKNGEKRDKAQQEKAQKPPIKEKPVVSTVVKEMAPPPSFERPALKLPEDECRRKVAEHIENTRAPIRQGELPRTNLGAGTTPAISFGAYSRGEIAASGIQPSNITSAIRSQMISSTAAMPGAKAGTSKEIHELKRKVLEKNNGILAAGQRSADAANTTSTARAPTTRASKAKALENLATIPENRKIRTTDSKTQKTTKGQTSRRRKDPKPGYCENCREKFDDFEDHIVSRQHRKFAMTPANWIDLDSVLEMLEREEKYDPDMDTADYDYH BL:SWS:NREP 1 BL:SWS:REP 127->184,255->644|HIM1_SCHPO|1e-35|33.3|388/545| SEG 107->118|kqssqsmskpkk| SEG 539->558|aanttstarapttraskaka| SEG 572->591|rttdsktqkttkgqtsrrrk| RP:PDB:NREP 1 RP:PDB:REP 120->190|2coeA|2e-04|18.3|71/120| RP:PFM:NREP 2 RP:PFM:REP 255->382|PF08630|4e-42|62.6|123/125|Dfp1_Him1_M| RP:PFM:REP 592->638|PF07535|7e-18|70.2|47/49|zf-DBF| HM:PFM:NREP 3 HM:PFM:REP 255->383|PF08630|1.3e-46|51.6|124/125|Dfp1_Him1_M| HM:PFM:REP 591->639|PF07535|4.5e-26|63.3|49/49|zf-DBF| HM:PFM:REP 135->196|PF00533|0.00035|31.4|51/78|BRCT| GO:PFM:NREP 2 GO:PFM GO:0003676|"GO:nucleic acid binding"|PF07535|IPR006572| GO:PFM GO:0008270|"GO:zinc ion binding"|PF07535|IPR006572| RP:SCP:NREP 1 RP:SCP:REP 136->183|1cdzA|3e-04|25.0|48/96|c.15.1.1| HM:SCP:REP 133->189|1cdzA_|4.1e-05|28.1|57/96|c.15.1.1|1/1|BRCT domain| OP:NHOMO 82 OP:NHOMOORG 76 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------11111111111111111111111112111112111111111111-11111--111111111---111111112----1111---1-21-1------------------------------------------------------------------------------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 71 STR:RPRED 10.8 SQ:SECSTR #######################################################################################################################cccccccccccccccccccTTcEEEEEcTTHHHHHHHHHHHHHHTcEEcccccTTccEEEEccccHHHHHH################################################################################################################################################################################################################################################################################################################################################################################################################################################################################# PSIPRED ccEEEcccccccHHccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccEEEccccccccccccccccccccccccccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHHccccccccccEEEEEEEcccccccHHccccccccccccccccccccccccHHHHccccccHHcccccccccccccccccccccccccccccHHHHHHHHcccccccHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccEEEEEEcccccccEEEEEcccccccccccccEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccHHccccHHHHcccHHEcccccccccccccccccccccccccccccccccccccccccccHHEEEccccccccccccccccccHHHccccccHHHHHHHHcHHHHHccHHHHHHHccHHHHHHHHHHHHHHcccccccccccccccccc //