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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01276
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  33/68 : Bacteria  494/915 : Eukaryota  161/199 : Viruses  2/175   --->[See Alignment]
c.31.1
:337 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   11->324 2nyrA PDBj 7e-42 43.9 %
:RPS:PDB   22->324 2b4yA PDBj 2e-16 34.7 %
:RPS:SCOP  18->188 1iciA  c.31.1.5 * 2e-39 37.5 %
:RPS:SCOP  218->327 1iciA  c.31.1.5 * 2e-20 34.5 %
:HMM:SCOP  11->327 1j8fA_ c.31.1.5 * 7.8e-70 44.1 %
:RPS:PFM   33->275 PF02146 * SIR2 7e-39 53.1 %
:HMM:PFM   33->275 PF02146 * SIR2 2e-39 38.9 175/181  
:BLT:SWISS 22->327 NPD_PYRHO 3e-42 48.3 %

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01278 GT:GENE CIRG_01276 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 337 SQ:AASEQ MASAPGASVIPEADLLSFREHLRSSKRVMAVIGAGLSAASGLPTFRGVGGLWRRYSAVDLATPEAFNATPGLVWQFYGYRRHMALLAKPNRAHYALAEFAKKNPNFIALTQNVDGLSERAGHPETQIQRLHGSLFTIKCANEYCTYSRDNDFTDPIVPALEIPKIPFGVDPYPKDHTGERAGQALEDAMKSNAAGPGWAPGSGELDISNPNVPIPNLREEDLPPCPECSTGLLRPGVVWFGEPLVEETINTVEDWLKNGPVDLVLVIGTSARVFPAVSYIDRGRCKGARVAIINMDRTHLPRTGMKPGDWIFEGDASAIIPELLKEVVGEIELPENQ BL:SWS:NREP 1 BL:SWS:REP 22->327|NPD_PYRHO|3e-42|48.3|234/249| BL:PDB:NREP 1 BL:PDB:REP 11->324|2nyrA|7e-42|43.9|253/259| RP:PDB:NREP 1 RP:PDB:REP 22->324|2b4yA|2e-16|34.7|242/257| RP:PFM:NREP 1 RP:PFM:REP 33->275|PF02146|7e-39|53.1|177/178|SIR2| HM:PFM:NREP 1 HM:PFM:REP 33->275|PF02146|2e-39|38.9|175/181|SIR2| GO:PFM:NREP 6 GO:PFM GO:0006342|"GO:chromatin silencing"|PF02146|IPR003000| GO:PFM GO:0006476|"GO:protein amino acid deacetylation"|PF02146|IPR003000| GO:PFM GO:0008270|"GO:zinc ion binding"|PF02146|IPR003000| GO:PFM GO:0016811|"GO:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides"|PF02146|IPR003000| GO:PFM GO:0045449|"GO:regulation of transcription"|PF02146|IPR003000| GO:PFM GO:0070403|"GO:NAD binding"|PF02146|IPR003000| RP:SCP:NREP 2 RP:SCP:REP 18->188|1iciA|2e-39|37.5|168/256|c.31.1.5| RP:SCP:REP 218->327|1iciA|2e-20|34.5|103/256|c.31.1.5| HM:SCP:REP 11->327|1j8fA_|7.8e-70|44.1|247/0|c.31.1.5|1/1|DHS-like NAD/FAD-binding domain| OP:NHOMO 940 OP:NHOMOORG 690 OP:PATTERN 11---11111111111-12222221--1----1--------------------11111111---1--1 1-1-12-222211111111-11111111111111111----1----11----1---2----11-2211211--1111---1111-11111111111---11111111111---------------1----1---1-11132---411------------------------------------11111----11111111111111111111111111212-1-------111-1111111111111111111------------------1-1-1----------1--------------------------1----------1---1111111111--11111---1111-1-1---121-11-112-1-1111-111-----1-222---11-11--------------1--111--1-------------1111---11111111---------11--111------------------------------1111--1-1-2111121111122-11111112212221--1111112112--1---2----11----------222122111---11----1111111-111211123-1--11111-211-111111--221--11-121-11111111111111111111111--1-11-------111111111111111-1-1111111111111111111111111111111111111111111111111111-111111111111-------------1121----11--2-22---11111111-112-222211-211--22322----------111111111111111111111111--------111111------------------------------------111--11111-1- --11111-2121--1131-222121222211111212222222222122212221-3-1-211211-1-1--111-----133312---2-333231-1----121113345425441-11-123215-6J4-4461212422221221221-4221234222522111112-3411227----14221153121112- -------------------1--------------------------------------------------------------------------------------------------------------------------------------------1-------------- STR:NPRED 336 STR:RPRED 99.7 SQ:SECSTR ccccccccccccccHHHHHHHHHHccEEEEEEcGGGGGGGTccccTTccHHHGGTccHHHccHHHHHHcHHHHHHHHHHHHHHHTTccccHHHHHHHHHHHTTcEEEEEEcccccHHHHHTcccccEEETTEEEEEEEETTTccEEEcccccccGcccccccccccGGcccEEETTEEEEEEEETTTccEEEcGTTcccccTTcccccccGGGcccccGGGcccccTTTcccEEEEEccTTccccHHHHHHHHHHHHHcGccEEEEEccccccTTGGGHHHHHHHTTccEEEEEccccTTcTTGGGGccEEEEccHHHHHHHHTHHHHHHcccccc# PSIPRED cccccccccccHHHHHHHHHHHHHcccEEEEEcccccHHcccccccccccHHccccHHHcccHHHHHHcHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccEEEEEcccccHHHHcccccccEEEEcccEEEEEEcccccccccccHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccEEccccccccccccccccEEccEEEEEcccccHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHccccEEEEccccccccccccccccEEEEccHHHHHHHHHHHHcccccccccc //