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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01280
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  14/915 : Eukaryota  104/199 : Viruses  0/175   --->[See Alignment]
c.1.8e.42.1
:902 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   448->858 1eqpA PDBj 9e-59 36.1 %
:RPS:PDB   501->827 1ceoA PDBj 7e-20 19.0 %
:RPS:SCOP  368->633 1m1cA  e.42.1.1 * 2e-55 15.7 %
:RPS:SCOP  630->856 1gvyA  c.1.8.3 * 2e-29 9.5 %
:HMM:SCOP  441->864 1h4pA_ c.1.8.3 * 9e-105 39.7 %
:RPS:PFM   509->742 PF00150 * Cellulase 7e-08 32.0 %
:HMM:PFM   506->747 PF00150 * Cellulase 1e-13 23.5 213/287  
:BLT:SWISS 388->857 EXG2_SCHPO e-123 48.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01282 GT:GENE CIRG_01280 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 902 SQ:AASEQ MPQRSRDHHRGYEPEWEDRQKKPDRHRYRDDSYDYEYDDDDIIDAEERRYEDGGVDEYDDNDGGYDDYEGEEESEVIVVDSRPNFARPPNVRASPRRASPPPYMGGRERSRQHKAKESPATSPAKKRDRERDREGHRRRRDSTADEDGPVGARLRERVAREKYREKDIADVRARSKDERKRSVQRDRARERERERVREKHASSGSANSATQLLSADALSKLNKYNAKRDAAERQREAKDEQRSRDKDKRRRKKEGFFVGKSRDRGTSREGGREKSKRRLVSGAMMEEGRGPELRVRGGGRHGQKWREDDRDGGGGGGGGGRGGKWFSNWSKKKKILVIVGILALLLIIIIPVGVVVSKKKDDEGGSAGHGDGDAPSNDNLKEIDRDSIPQSARGTYLDPFTWYDTADFNVTYTDETVGGLPVMGLNAAWDDSAQANEHVPPLNKRFPYGKQPIRGVSVGGWLSLEPFITPSFFKKYSVHDNVVDEYTLTRRLASSAKPTLEKHYATFITERSFREIRDAGLDHVRIPYSYWAVKKFDDEPYVEQVSFRYLLRAIEYCRKYGLRVSLDLHGLPGSQNGWNHSGRHGVIGWLNGPDGDKNAQRSLDIHDQLSKFFAQPRYKNVVTLYGLANEPLMLKLPIEPVIDWTKKAAEIVEKNGMKQHIVFGDGFLKLSKWKTILQDTGHSLLLDTHQYTIFNTELIGLEHKKKLEFVCDGWVELLSDSNSKGTGWGPTICGEWSQADTDCARYLNNVGVGTRWTGTMDSPSAKDQVSEPLCPAAKSGNGKACSCDGANADPSEYSDAYKKFLLTYAEAQMSAFEKGWGWFYWTWETESAVQWSWRRGLEAGILPKKAYEPSFKCGDTLPELVICRSTISALWCVGTCNIYCGTWSESWDVLHACDILEL BL:SWS:NREP 1 BL:SWS:REP 388->857|EXG2_SCHPO|e-123|48.8|453/570| TM:NTM 1 TM:REGION 335->357| SEG 24->80|drhryrddsydyeyddddiidaeerryedggvdeyddndggyddyegeeesevivvd| SEG 86->102|arppnvrasprrasppp| SEG 127->141|rdrerdreghrrrrd| SEG 185->198|rdrarererervre| SEG 238->253|kdeqrsrdkdkrrrkk| SEG 308->323|ddrdgggggggggrgg| SEG 331->360|kkkkilvivgilallliiiipvgvvvskkk| BL:PDB:NREP 1 BL:PDB:REP 448->858|1eqpA|9e-59|36.1|379/394| RP:PDB:NREP 1 RP:PDB:REP 501->827|1ceoA|7e-20|19.0|284/332| RP:PFM:NREP 1 RP:PFM:REP 509->742|PF00150|7e-08|32.0|206/273|Cellulase| HM:PFM:NREP 1 HM:PFM:REP 506->747|PF00150|1e-13|23.5|213/287|Cellulase| GO:PFM:NREP 2 GO:PFM GO:0004553|"GO:hydrolase activity, hydrolyzing O-glycosyl compounds"|PF00150|IPR001547| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF00150|IPR001547| RP:SCP:NREP 2 RP:SCP:REP 368->633|1m1cA|2e-55|15.7|254/651|e.42.1.1| RP:SCP:REP 630->856|1gvyA|2e-29|9.5|200/376|c.1.8.3| HM:SCP:REP 441->864|1h4pA_|9e-105|39.7|398/0|c.1.8.3|1/1|(Trans)glycosidases| OP:NHOMO 414 OP:NHOMOORG 118 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------2---111----------------------------------------------------------------------------------------------------------------------------------------------------------3-----------------------------------------1--11------------------------------------------------------------1--------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------1-----------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------- ---------------3355445364462222222221111111222532344742111111123531222432324332323334343-8G53E9E8767348234-18--------------------------------------------------------1-------------------13455-44-87AE- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 425 STR:RPRED 47.1 SQ:SECSTR #######################################################################################################################################################################################################################################################################################################################################################################################################################################################cccGGGccTTTccEEEEEcTTcccccTTTcHHHHGTTccTTccccHHHHHHHHHcccccccHHHHHHHccHHHHHHHHHHTccEEEEEEEGGGTcccccTTcccHHHHHHHHHHHHHHHHTTcEEEEEEEEcccccTTTcHcccTTcccTTcTTHHHHHHHHHHHHHHHHHHHTTTGGGccccEEEEcccccccGGcccHHHHHHHHHHHHHHHHHcccccEEEEcHHHcGGGGGGccccccccEEEEEEEcccHHHHTTTcTTHHHHHHHcHHHHHHcccccccEEcccHHHHHHHHcGGGGGGGGGTTcTcccTTcTEEcHHHHHHHHHHHHHHHHHHccEEEEEEEccTTccHHHHHHHHHHHHHHHHHHHHHHHTTcEEEEcccccTTcGGGcHHHHHHTTcccccTTccccEEEEEEEcc###################################### DISOP:02AL 902-903| PSIPRED cccccHHHHHcccccHHHHcccccHHHccccccccccccccccccHHccccccccccccccccccccccccHHHHHHHHccccccccccccccccHHcccccccccccccccccccccccccccHHHHHHHHHccccHHHHHHHHHccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHcccccHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHccccccccccccHHHHHHHHHHHHHHcccHHHHccccccccHHHHHccccccccccccccccccccccccccEEHHHHHHHHHHHHHHcccccEEEccccccccccccccccccccccccccccccccccccccEEcccccccEEcccEEEEccccccHHHHHccccccccccccccccccccccccccccEEEEEEcHHHHHcccccHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccEEEEcccHHHcccccccccccccHHHHHHHHHHHHHHcccEEEEEccccccccccccccccccccHHHcccccHHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHcccccccEEEEEcccEEccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccccccccccccccccccccEEEEcccccccccccccccccccccccccEEEcccccccHHHccHHHHHHHHHHHHHHHHHHHHcccEEEEEEEccccccccHHHHHHcccccccccccccccccccccEEEEHHHcccEEEEEccEEEEccccccccHHHHcccccc //