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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01282
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  532/915 : Eukaryota  193/199 : Viruses  1/175   --->[See Alignment]
c.67.1
:852 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   200->522 2w8wA PDBj 4e-22 30.6 %
:BLT:PDB   569->846 2jgtB PDBj 7e-08 19.3 %
:RPS:PDB   159->519 3a2bA PDBj 5e-51 25.7 %
:RPS:PDB   569->842 3a2bA PDBj 1e-21 18.7 %
:RPS:SCOP  159->517 1bs0A  c.67.1.4 * 2e-47 23.3 %
:RPS:SCOP  569->838 1bs0A  c.67.1.4 * 2e-15 19.6 %
:HMM:SCOP  86->524 1fc4A_ c.67.1.4 * 2.9e-52 24.7 %
:HMM:SCOP  558->838 1bs0A_ c.67.1.4 * 3.5e-12 25.5 %
:HMM:PFM   160->502 PF00155 * Aminotran_1_2 5.6e-22 23.2 310/363  
:BLT:SWISS 93->520 LCB2_SCHPO 2e-32 31.9 %
:BLT:SWISS 564->852 BIOF_CLOTH 4e-13 24.7 %
:TM

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01284 GT:GENE CIRG_01282 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 852 SQ:AASEQ MLGISKFRRRFPRGGIQFVRKSGASFVEEHSVMPIEDADEAKLAISDSKAGSLENDPQKVNFTRPVEPPVALVEKFLFLIWSIMLVLTQVWSDFIEKRPFRYVLKSDIMAHYFFLPAGRHDPRFVTSGPYSRINVKMIPPNVTRRYEEDTDLSTFEEVEIINCASNNYGGFTELENRSGEIIETALQLLPFAPAPNALELRVRAKCAEYMSCDACVTAPSGFSTNRLIFATVAGVARSQGRKLVFLCDRDSHNSMFTGAFFNKEAEVHKFDHNDLTDLEYKLRMQREQDPSALVCVAVEGIYSMEGSVSPGPALLALKKVYNFALLVDEAHSFMALGSAGRGSFNHWEDLGYKCPLEEVDVMSCMFSKSVGCTGGFALANGVFAEELRKQGETLKERGVETLSTVVLLRILNLLSKPKLIRHRMCLLRKKSKYISRALGNAGFRILSTPGSPIVCFPVGTVRQVIRFHAEALKEGVAVTGGVPPATPLWGCRIRVCIFATTSWPDIYKLLGTMLRIGQKVGVNGISPISFDAGLLAQQDPEDSMLEVESNSVDSDMLDYVIELSGSTKGLAGNTEVVRTGMESIRKYGIGPCSARWFYGSFDIFIQLERRLANLYPSLVAQSGKCRGMICGDAEITLGSTVAALVQPCSSGSTLNRVFIPNNAPHSVMAGARLNRPSKQVAATFYNAVEDIELPTGHKNVHATLYFETVRNGIPLDLHTFIRKIAPKVKRSGNLTGATIMFDDRNGLGMVGPQSLGYLNLMEAKHGVNFLNDALRPLQCEVEVIVAGSWFDAFGHQGGYVTGSASKVECLTWNTKAFFFSTPPMPVQAAMSDRMLQVLLNKDSKKKAVAWES BL:SWS:NREP 2 BL:SWS:REP 93->520|LCB2_SCHPO|2e-32|31.9|408/603| BL:SWS:REP 564->852|BIOF_CLOTH|4e-13|24.7|248/388| TM:NTM 1 TM:REGION 69->91| BL:PDB:NREP 2 BL:PDB:REP 200->522|2w8wA|4e-22|30.6|304/397| BL:PDB:REP 569->846|2jgtB|7e-08|19.3|230/363| RP:PDB:NREP 2 RP:PDB:REP 159->519|3a2bA|5e-51|25.7|335/392| RP:PDB:REP 569->842|3a2bA|1e-21|18.7|236/392| HM:PFM:NREP 1 HM:PFM:REP 160->502|PF00155|5.6e-22|23.2|310/363|Aminotran_1_2| RP:SCP:NREP 2 RP:SCP:REP 159->517|1bs0A|2e-47|23.3|326/383|c.67.1.4| RP:SCP:REP 569->838|1bs0A|2e-15|19.6|228/383|c.67.1.4| HM:SCP:REP 86->524|1fc4A_|2.9e-52|24.7|393/0|c.67.1.4|1/2|PLP-dependent transferases| HM:SCP:REP 558->838|1bs0A_|3.5e-12|25.5|239/0|c.67.1.4|2/2|PLP-dependent transferases| OP:NHOMO 1394 OP:NHOMOORG 734 OP:PATTERN --1------------------------------------------------------1111-111--- 112---------------------2------2----1--2-----111----111--1--1-1-2-2232--------------11113321-322---113332423241------2-21111122111111312--------1-2111112----1--11-2--1111211111111111111111112112222222222222222-1221222211-1111------211111111111111111--11-----------------1----------------------------------------------------111----------------------1--1---1-------1--111111--113111-----332321122-11111111111112-2222212316211--1112111221-1131------2-11111111123331-11111-111111----111-11-1--11111-1311211--21222214222222112222123111-11-1121---1---1---1--111-11-------322111---1-11-222---1111211112111122121-----------1------------2212-2112122111111222111222212211-----1-1----11111111112122222-12122222221222112211112211211111111111111111111221111111111111111---2222221112--3-1111-1-1----1----111111---11------11---1--1112111111111222311111122221111111111------1-11------------1------------------1--------11111-1----21 22--334-52213333242345335353444443333555434344322334432332411122331212112221312222222333-2332333644323354313247775362312223-544316F415553411524452432-4223135347A353431522E4641212172211348B44522365542 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-- STR:NPRED 734 STR:RPRED 86.2 SQ:SECSTR ###############################################################################################################HHHHHHHHHHccTTTcGGGcccccccEEEcTTcTTEEEEEcTTccEEEEEEcccccTTcGGGcHHGcHHHHHHHHHHHTTTTcccHHHHHHHHHHHHHHTccEEEEEccHHHHHHHHHHHcccHcTTccTTcEEEEETTccHHHHHHHHHccccEEEEEcTTcHHHHHHHHHHHHTccccccEEEEEEcccTTTcccccHHHHHHHHHHHTcEEEEEcTTTTTTccGGGccHHHHHTcTTTcccGGGccEEEEEcccTTccccEEEEEcHHHHHHHHHHcHHHHcHHHccccHHHHHHHHHHHHHHHHcTHHHHHHHHHHHHHHHHHHHTTccccccccccEEEEEcccHHHHHHHHHHHHHTTEEcEEEcTTTccGGGcEEEEEccTTccHHHHHHHHHHHHHHHHHcHcHTccccEEcccEEEEEcTTccHHHHHHcHHHHHHHHHHHHHHHHHHTTccHHHHcHHHHHHHHHHcccccccTTTTcccHHHHHHHHHHHHHHHHHHTTTTccEEEEEccHHHHHHHHHHHcccTTTTTcEEcEEEEETTccHHHHHHHHHcccEEEEEcEcTTcHHHHHHHTccccccEEEEEEccTTcccccHcHHHHHHHHHHHHHTcEHTcEEEEEcTTTTTTccGGGccHHHHHTcGGGccGEEEEcc#ccccEEcEEEEEcccTTccccEEEEEcHHHHHHHHHHcHHHHccccccHHHHHHHHHHHHHHHHcTHHHH###### PSIPRED cccHHHHHHHcccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccHHHcccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccccccccccEEcccccHHHHHHcccccEEEEEcccEEEEccccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHcccccEEEcccccHHHHHHHHHHHHccccccEEEEEEccccccccccccHHHHHHHHHHcccEEEEEccccccccccccccHHHHccccccccccccccEEEEEccHHHHHHHHHHHccHHHHHHHHHccccEEcccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccEEEEEEccHHHHHHHHHHHHHccEEEEEEccccccccccEEEEEccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccEEEEEEEccccccccccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHccccccEEEEccHHHHHHHHHHHHHHHHccccccccEEEEccHHHHHHHHHHHccccEEEEEcccccHHHHHHHHcccccccccEEEEEEEEEEEccccccccHHHHHHHHHHHcccEEEEEcccEEEEEccccccHHHHccccccccccccccccccccccEEEEEEcHHHHHHccEEEEccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHcc //