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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01283
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  48/915 : Eukaryota  165/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:305 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->209 3d5qC PDBj 2e-09 27.1 %
:RPS:PDB   1->212 1dohB PDBj 2e-20 19.4 %
:RPS:SCOP  3->210 1a27A  c.2.1.2 * 1e-19 18.8 %
:HMM:SCOP  2->242 1jtvA_ c.2.1.2 * 8.3e-38 25.1 %
:RPS:PFM   4->176 PF00106 * adh_short 6e-08 27.4 %
:HMM:PFM   4->177 PF00106 * adh_short 3.9e-23 26.4 163/167  
:BLT:SWISS 7->299 YCKF_SCHPO 3e-40 32.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01285 GT:GENE CIRG_01283 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 305 SQ:AASEQ MDGKVAVIAGGSAGLGCELASQLVQAGADVIILARNRERLEATEQELLALQVRKNQKICGRSVDLTDYSQIEAFAQSLDVSPGYVFCVAGGCAEEVGFFADISSRDIVSCFEKNYFSSAFVAHAFIRQWINQPKRSEPRHLIFTGSTAAFIAIPGYAAYTPTKTALRALADTLRQEVLMYESHVNIQVHCSFPGTIFTETFEKEQQKKPDLCKEIEGSDDEKNGMTSYAVAKGIIDGLKKNQYFIALDMQTRLLLNNMRGPSPAESYVWDWLLCIAASVVWPIFRRIFDRKTRIYGRERVQKSRE BL:SWS:NREP 1 BL:SWS:REP 7->299|YCKF_SCHPO|3e-40|32.5|283/503| TM:NTM 2 TM:REGION 5->27| TM:REGION 265->284| SEG 37->51|rerleateqellalq| BL:PDB:NREP 1 BL:PDB:REP 1->209|3d5qC|2e-09|27.1|199/253| RP:PDB:NREP 1 RP:PDB:REP 1->212|1dohB|2e-20|19.4|201/271| RP:PFM:NREP 1 RP:PFM:REP 4->176|PF00106|6e-08|27.4|164/169|adh_short| HM:PFM:NREP 1 HM:PFM:REP 4->177|PF00106|3.9e-23|26.4|163/167|adh_short| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| RP:SCP:NREP 1 RP:SCP:REP 3->210|1a27A|1e-19|18.8|202/285|c.2.1.2| HM:SCP:REP 2->242|1jtvA_|8.3e-38|25.1|227/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 266 OP:NHOMOORG 213 OP:PATTERN -------------------------------------------------------------------- --------------121----1---1------1----1-------------------1-----------------------------------------------1-----------------------1-------11-----1-1----------------1------1------------------------------------------------------111-----------------------1----------------11---------------------------------------------------------------------------1---------------------------------------------------------------------------------------1-----------------------------------------------------------------------111111--11-11--1111--11---------------------1----------------------1--------------------------------------------------------------------------------------2---------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------1111------------------------------------------------- ----211-111-11122-1123332321111112111322233111222123221-11111111111111111111111111111111-113211111111111111-21112--11-1--11111111111-1111---1-111111-1---1-21111111111111141-11111-------311122-1132221 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 305 STR:RPRED 100.0 SQ:SECSTR cTTcEEEETTTTcHHHHHHHHHHHHTTcEEEEEEcccHHHHHHHHHHHHHTTccEEEEEccTTcHHHHHHHHHHHHHHHccccEEEEcccccccccccGGGccHHHHHHHHHHHTHHHHHHHHHHHHHccTTcEEEHTcEEEEccGGGTcccccccHHHHHHHHHHHHHHHHHHHHHGGGHTTcTcEEEEEEEcccccHHHHHHGGGGcTTcccTTTcccccHHHHHHHHHHHHHHHHHTTccEEEEcccHHHHHcHHHHTccHHHHHHHHHHccEEEEEEEEEEcGGGcEEEEEEEEEEEHHHH PSIPRED ccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHcccEEEEEcccccccccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccHHHHccccccHHHHHHHHccccccccccHHHHHHHHHHHHHccccEEEccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHccc //