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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01287
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  15/68 : Bacteria  426/915 : Eukaryota  95/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:553 amino acids
:PSIPRED
:RPS:SCOP  25->210 1pw4A  f.38.1.1 * 1e-07 11.0 %
:HMM:SCOP  26->549 1pw4A_ f.38.1.1 * 2.7e-61 25.2 %
:RPS:PFM   108->518 PF06609 * TRI12 3e-16 26.6 %
:HMM:PFM   56->453 PF07690 * MFS_1 3.1e-39 28.3 343/353  
:BLT:SWISS 91->546 YAN6_SCHPO 2e-47 27.9 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01289 GT:GENE CIRG_01287 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 553 SQ:AASEQ MSKPLPPVPTLKVSERFSDEIQILPPSSQFDIEEPPDPTKRSKKGWPFRLAFFALATVAFASALDATSLSVALPIIAKELGGTTLESFCAGVSFLLTSILFQPVHTALSDIFGRKQILYCCIVLFGVGSLIIGFSRDMKTLIAGRAVQGVGGGGLEALSEIILTDITTLAERPLYLGILSFVWAAGSAFGPLIGGMFAELVSWRWIAWINLPILIFPVVLVPLFLRLKTIPESLRTKFAKVDWIGIALFIPGLTLFALAITWAGSLYRWTSAGTVVPLVFGILLLIAFGVYEGYSKTPLLPYWLFTVPTRWGALLGAFLHGLVLYTVVFYVPIYFEGSLGLEPISGAITALPLSVGVSISAVATAFAIEYIRRYTWAAWSGWLLSTVGMGLFILYDSHTSVPDRVGLQVVAALGLGILFPGLGIPVQAASDELQAGIAMGTFVFARQLGAVIGVALGSGIFANKFAAEIKNVNLPGPLKGLADGYAAISMIPTLKTLDLPRVEKLVILDVYTDATRTVWITMTVISGIGLLTCFAIRELTLERTETGRQAFEG BL:SWS:NREP 1 BL:SWS:REP 91->546|YAN6_SCHPO|2e-47|27.9|444/589| TM:NTM 13 TM:REGION 52->74| TM:REGION 87->109| TM:REGION 116->138| TM:REGION 177->199| TM:REGION 205->226| TM:REGION 242->264| TM:REGION 272->294| TM:REGION 313->335| TM:REGION 347->369| TM:REGION 377->399| TM:REGION 408->430| TM:REGION 441->463| TM:REGION 510->532| SEG 50->66|laffalatvafasalda| SEG 143->154|agravqgvgggg| SEG 211->225|lpilifpvvlvplfl| SEG 413->425|lglgilfpglgip| RP:PFM:NREP 1 RP:PFM:REP 108->518|PF06609|3e-16|26.6|403/526|TRI12| HM:PFM:NREP 1 HM:PFM:REP 56->453|PF07690|3.1e-39|28.3|343/353|MFS_1| RP:SCP:NREP 1 RP:SCP:REP 25->210|1pw4A|1e-07|11.0|182/434|f.38.1.1| HM:SCP:REP 26->549|1pw4A_|2.7e-61|25.2|428/447|f.38.1.1|1/1|MFS general substrate transporter| OP:NHOMO 2484 OP:NHOMOORG 536 OP:PATTERN ------21------1--1-----1----------1---1--1-341-1--121--------------- 3251F12433313152111-13--5222222344456666263242112331555114--2442532B891---------2-211--111---1-----1-1---2-1-----------------111---1111-3222121122--------------------2--1-------------3341---262355656776478677731211266622312212122235E111111111111111111-32221221-31244--32213211111--------11-------------------------------------24----11-1-11-33-111-----1--2-11231---231---------3--------2-3232111211-11221222213-111112-3-3--822256-666--21-------------2222222231111--1-------------------------------22--2---15666562545544A8666659B494547--333-1111211112-------2---------------11-1---1-1--2-1-11111-1211221-2-----------------------1-33221-------2-1111---222--------1------------2122222------------------------------121252-1----------------4---------211111111111----22121------2------1-----------------111--11213534-44431344-11111111----233333-----2221111111------------------------------------------------------------1-1 ----11--------4OGcGNMVTgniZJHCHFFXXMGNLLFPQC8ASHIXaZmXDFLKHBCD366227241182A1433526665785-FG6G5A47548716788---------------------------------------------------------------------------------1-U--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PSIPRED ccccccccccHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcc //