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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01291
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  47/199 : Viruses  0/175   --->[See Alignment]
g.41.8
:58 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   5->54 1vs61 PDBj 3e-05 36.0 %
:RPS:SCOP  5->55 1vs611  g.41.8.6 * 4e-06 35.3 %
:HMM:SCOP  5->54 2gya11 g.41.8.6 * 8.3e-09 36.0 %
:HMM:PFM   12->53 PF00471 * Ribosomal_L33 5.9e-07 21.4 42/48  
:BLT:SWISS 4->55 RM33_BOVIN 1e-09 48.1 %

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01293 GT:GENE CIRG_01291 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 58 SQ:AASEQ MAKRAKSRTIAVRLISMAMTGYYKTLVRPRASRPLSMLKYDPVVKKKVLFLEARRGGK BL:SWS:NREP 1 BL:SWS:REP 4->55|RM33_BOVIN|1e-09|48.1|52/65| BL:PDB:NREP 1 BL:PDB:REP 5->54|1vs61|3e-05|36.0|50/54| HM:PFM:NREP 1 HM:PFM:REP 12->53|PF00471|5.9e-07|21.4|42/48|Ribosomal_L33| RP:SCP:NREP 1 RP:SCP:REP 5->55|1vs611|4e-06|35.3|51/54|g.41.8.6| HM:SCP:REP 5->54|2gya11|8.3e-09|36.0|50/0|g.41.8.6|1/1|Zn-binding ribosomal proteins| OP:NHOMO 47 OP:NHOMOORG 47 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------1-11--1111--1111111111111111111-111111---111-11-----------1-----------------1-1111-1----111--------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 50 STR:RPRED 86.2 SQ:SECSTR ####cccccccccccccccccccccccccccccccccccccccccccccccccc#### PSIPRED cccHHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHccccccEEEEEEEcccccc //