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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01296
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  191/199 : Viruses  0/175   --->[See Alignment]
b.69.11b.69.4
:713 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   177->285 2ovrB PDBj 2e-04 31.9 %
:RPS:PDB   215->364 1e2rA PDBj 3e-13 4.6 %
:RPS:SCOP  254->371 1k8kC  b.69.4.1 * 2e-13 10.2 %
:HMM:SCOP  44->387 1ri6A_ b.69.11.1 * 8.6e-19 20.8 %
:RPS:PFM   543->569 PF08159 * NUC153 3e-06 63.0 %
:HMM:PFM   543->571 PF08159 * NUC153 3.1e-17 69.0 29/30  
:HMM:PFM   254->282 PF00400 * WD40 7.3e-05 37.9 29/39  
:BLT:SWISS 1->585 NOL10_SCHPO e-115 46.9 %
:BLT:SWISS 611->708 GASP1_MOUSE 7e-04 31.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01298 GT:GENE CIRG_01296 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 713 SQ:AASEQ MKLTNHSTVPVYTISGSSTARPLPEWLARRRKRSLKADPEYANRVELLQDFEFEEASQCIRVSEDGQWVMSTGTYKPQIHTHYLPHLSLSWARHTISLNTTFQILSSDYSKSLHLQADRSLEFHTPQGCHYTTRLPRYGRDLVYDRQSAEALVPAVGVNQDGMGEVFRLNLEQGRYMRSYEVDVGGDDFTSAGGGALQGGINTGSVNTGAVAEESHNMLAFGTSLGTVELWDSRAKGRAAVLLPPSDSQPGEGRSEITALQFHRSGLTLATGSSQGLIYLYDLRSPVPLLKKDQGYGYPIHTLNFLTPSTSTREQTTDPKILSSDKRIIKIWDARDGTPWTSVEPAVDINCVAWCKDSGMILTANEGRQQHAFFIPQLGPAPRWCAFLDNLVEEMAEDPNDPHAFNAGQAGSVYDNYKFLTVPQLRSLNLDHLIGRTSLLRPYMHGYFVAQRLYEEARLITNPFVWEEERAKRIKEKIDKERESRIRGKKKVAAKVNKKLAEKLLEKEERHERRQAQKILAQGGDESSAKPEAASTGKGILHDPRFAKLFEDEEFAVDETSREFLALNPSSATAPAEKRERGLTAVEEEAIDEVPGSSSDESSNEHESPAKPKSSTSISTASYKRTKRPPPKMEISSSFRTAKSRDRSFESRVQKTRAKERPAATSRAVGEKTVTFAPRAKSRVKPMAEPESRGSYRSAKDRRSASANTFRKM BL:SWS:NREP 2 BL:SWS:REP 1->585|NOL10_SCHPO|e-115|46.9|508/634| BL:SWS:REP 611->708|GASP1_MOUSE|7e-04|31.6|98/1347| SEG 467->487|eeerakrikekidkeresrir| SEG 489->509|kkkvaakvnkklaekllekee| SEG 597->608|sssdessnehes| BL:PDB:NREP 1 BL:PDB:REP 177->285|2ovrB|2e-04|31.9|91/442| RP:PDB:NREP 1 RP:PDB:REP 215->364|1e2rA|3e-13|4.6|131/532| RP:PFM:NREP 1 RP:PFM:REP 543->569|PF08159|3e-06|63.0|27/30|NUC153| HM:PFM:NREP 2 HM:PFM:REP 543->571|PF08159|3.1e-17|69.0|29/30|NUC153| HM:PFM:REP 254->282|PF00400|7.3e-05|37.9|29/39|WD40| GO:PFM:NREP 1 GO:PFM GO:0005634|"GO:nucleus"|PF08159|IPR012580| RP:SCP:NREP 1 RP:SCP:REP 254->371|1k8kC|2e-13|10.2|108/354|b.69.4.1| HM:SCP:REP 44->387|1ri6A_|8.6e-19|20.8|264/0|b.69.11.1|1/1|Putative isomerase YbhE| OP:NHOMO 224 OP:NHOMOORG 191 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 11-11111311111111111111111111111111111111111111111111111111111111111111111111-1111111111-121111111111-111111112111112111111111121471-3141111111211111111111111113112111111-1111111-81111111-21111111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 417 STR:RPRED 58.5 SQ:SECSTR #################################################EEcTTTccEEEEEcTTccEEEcEEETTTEEEEEEcTTccccccEEEEcccccEEEEEEccGGGcccEEEEETTccEEEEccccccccEEEEEccccccccEEEEEEccGGGcccEEEEETTccEEEEEEcccccEEEccccccccccccccEEcccccccccccccHHHHHHHHHHHHHHHHHHccTTccccHHHHTcccccTEEEEcHHHHHHHHHHHHccccccccccHHHHHHHcEEEcccGGGcccccccccEEcccEEEEccGGGEEEEGGGTEEEEEETTTccEEEEEEccTTEEEEEEcTTccEEEEEETETTEEEEEETTTccEEEEEEccEEccccccEEccccEEEcccEcccTTTTTTccEEEEEEEEcTTccEEEEEEcccTTccccEEEEEEcccTTccccEEE####################################################################################################################################################################################################################################################### PSIPRED cccccccccEEEEEEccccccccHHHHcHHHHcccHHcHHcccEEEEEEEccccccEEEEEEcccccEEEEEcccccEEEEEEccccEEEEEcccccccEEEEEEcccccEEEEEEcccEEEEEcccccEEEEEcccccEEEEEEcccccEEEEEEEccccccccEEEEEHHccEEEcccccccEEEEEEEcccccEEEcccccEEEEEEEEcccccEEEEEEcccEEEEEEcccccEEEEEEccccccccccccEEEEEEEcccccEEEEEEccccEEEEEcccccEEEEEEccccccEEEEEEccccccEEEEccccEEEEEcccEEEEEEcccccEEEEEcccccEEEEEEcccccEEEEEccccEEEEEEccccccccEEEccccccEEEEEEccccccEEccccccccccccEEccHHHHHHccccEEEEccccEEHHHccEEEcHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHccccccccccccccccccHHHHHccccccccccHHHHHHHcHHHHcccHHccccccHHHHHHHHHHcccccccccccHHHHHccHHHHHHHHHHHHHHHHccHHHHEEccHHHHHHHHcccHHHHHHHHHcccccccccccccEEEEEEccccccccccccccccccccccccccccccccHHccc //