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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01298
DDBJ      :             
Swiss-Prot:ATG13_COCIM  RecName: Full=Autophagy-related protein 13;

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  76/199 : Viruses  0/175   --->[See Alignment]
:908 amino acids
:PSIPRED
:RPS:PFM   1->235 PF10033 * ATG13 1e-41 46.2 %
:HMM:PFM   2->236 PF10033 * ATG13 7.6e-75 44.9 225/233  
:HMM:PFM   716->803 PF10608 * MAGUK_N_PEST 0.00028 27.9 68/89  
:BLT:SWISS 1->908 ATG13_COCIM 0.0 99.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01300 GT:GENE CIRG_01298 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 908 SQ:AASEQ MQNYHTKAALVILHSRVDLSPATYHGVIRTNKWFNVEVNETEDLKDSLGVWKYSNCTDSRPPPLIIEVYLDLTQLTNNQSLVIIDDSGKRWDVVEALATYGCLDNSRTSKSGVILERWRIDLGPGPDDLPLDMGSILPTVYKKSIVVFRSLYAYSKLLPAWKYSKRHSKIRPNPALSLKYRILQGPGGQIRSTNDPLTVPLHPGNGPVVDTYSFGVTDSPAGPLSALVTYRTNCDFRVDDSEALLSSRFMGVDERFFKPSLPSEDNFAAAGQEHGSLPVQKRDVGRPDLGQAYGSMSTFHQVGATTGASPISALRAARELAAGSPSSPTRPSHSPRPSQAGRVAALSGEGNHLIQRRPSISIQPFKAPPLSASPALVDSPVGSQPKNSAPRVGPMDITSSARQMPPPHGTPTTSRRSAHVSESAIASSTSGSPRPAPISKYSSSFSHRRGRLSSGGASKTDDDNNSSGRVSVSSSTVHPGSGTSADPATTSSGSLQADEDNISDFLKMLEMGKDLLSRKDSKSLDKNTKRTSAALSRFQKMRDSNAVLSDSMSSSLLLQPSSISSSKQLPNAATSVAGASISVSSSPGKAISPHTQHIPAVPSRLSSNSVVDYSHSHEDRHERRHRLSHESRRSPSEERANDEPRLKRDESTANAIDIPTSPRPFIPSFRRSSSAAQRRSSPPVEDDLGDFLPFGMRSLSLGAEDRSTLSLSELVRQQESSVPASDTNALQQQNQKDTRTGQSIVDESPSRIDNVPGTSSPRQYQPRFAHGRGRGSFGHPQPHVSAASSLGRASPIPNVTDADRERYIGSGNNGGTAVPPDTRRGSSHRFSFNRHLGTPANMDEDEPLLFAMSDFGASRRSLEEGRKGATTAGADHGGAPSTELQPAAETRSEGGPPSVSRGRYRAWP SW:ID ATG13_COCIM SW:DE RecName: Full=Autophagy-related protein 13; SW:GN Name=ATG13; ORFNames=CIMG_01222; SW:KW Autophagy; Complete proteome; Cytoplasm; Membrane; Phosphoprotein;Protein transport; Transport. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->908|ATG13_COCIM|0.0|99.8|908/980| GO:SWS:NREP 5 GO:SWS GO:0006914|"GO:autophagy"|Autophagy| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0015031|"GO:protein transport"|Protein transport| GO:SWS GO:0006810|"GO:transport"|Transport| SEG 121->134|dlgpgpddlpldmg| SEG 324->338|spssptrpshsprps| SEG 421->432|sesaiasstsgs| SEG 466->477|ssgrvsvssstv| SEG 544->566|snavlsdsmssslllqpssisss| SEG 572->593|aatsvagasisvssspgkaisp| SEG 614->639|shshedrherrhrlshesrrspseer| SEG 658->681|iptsprpfipsfrrsssaaqrrss| SEG 868->879|gattagadhgga| RP:PFM:NREP 1 RP:PFM:REP 1->235|PF10033|1e-41|46.2|223/227|ATG13| HM:PFM:NREP 2 HM:PFM:REP 2->236|PF10033|7.6e-75|44.9|225/233|ATG13| HM:PFM:REP 716->803|PF10608|0.00028|27.9|68/89|MAGUK_N_PEST| OP:NHOMO 77 OP:NHOMOORG 76 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------11111111111111111111111111111111111111111111111111111111-1--1-1------1111111----11-11-1----111-1---------------------------------------------------------------------------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PSIPRED ccccEEEEEEEEEEccccccccccccccccccEEEEcccccccHHHHHHccccccccccccccEEEEEEEcHHcccccEEEEEEcccccccHHHHcccccccccccccccccEEEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEcccccccccccccEEEEcccccccEEEEEEEcccccccccEEEEEEEccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccEEccc //