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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01300
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  27/199 : Viruses  0/175   --->[See Alignment]
:654 amino acids
:SECSTR
:PSIPRED
:RPS:PDB   324->624 3c46B PDBj 6e-04 5.7 %
:HMM:PFM   405->421 PF10452 * TCO89 7.8e-06 64.7 17/606  
:HMM:PFM   484->514 PF10452 * TCO89 5e-07 29.0 31/606  
:BLT:SWISS 25->127 RN111_XENTR 4e-05 34.0 %
:BLT:SWISS 354->460 TAB3_XENLA 8e-05 33.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01302 GT:GENE CIRG_01300 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 654 SQ:AASEQ MPSSHSVSPVKRSVSSPQAPPDHSAMSRHSSSTTAAHQPQPHKSTVHKSHRPYVVGTHRVHGRTQSHKNLNKLHRLALVHNLAVDGVAAPPTPFRHQRKKSAPVSPSTSPRTNQNHVRWNQSTIPLTAASPNTTVRKNLSTPALRRNGSGILVKKTHVVNQTEKAETSEKKTVGFTLVDSDGEDEWEDHSSISASSTRRNSIVSAKMNGQNSLTASVSCAKSPLVQESHNTDINDRNVPRQEEQLQKGHARDKDAVSEAPSDQTRASDQHLIASRILHHPHSSKVPPAISSISATATPLPSDRSPRSSSFANLASSLNAVSHSPAPSTLSSMAMNNPHAASSSAEGGVSRFLINSTGPRTDPRFSSGPSTPSSFLPHYHPQSPPSPESTALKRSKSPKPPNNGPIEPHSRTQQKLWLQRTATMSNSPPDTFIPGIPATSTIDSNYVAGAQSRPGTGGYGPDGRRFMIGATGSTGVSTDGEIKRSRKIYDRFTTEYSVVHRFKNPVVDSFKRLRQIPGSNAGGKLTRVNSARDLVNGHDPSRPQSREDMLSATAMEEAGVGSQFLSKTHSMKQSQVRFQGQDGIVHVGEVEQGVERLHLENPPSRTSVHTDGNTYGQQIDDHGDVRTDSASYHPTESELLIRRMWESREVPVAGE BL:SWS:NREP 2 BL:SWS:REP 25->127|RN111_XENTR|4e-05|34.0|100/954| BL:SWS:REP 354->460|TAB3_XENLA|8e-05|33.7|101/692| SEG 2->17|psshsvspvkrsvssp| SEG 190->202|ssisasstrrnsi| SEG 300->323|psdrsprsssfanlasslnavshs| RP:PDB:NREP 1 RP:PDB:REP 324->624|3c46B|6e-04|5.7|298/1094| HM:PFM:NREP 2 HM:PFM:REP 405->421|PF10452|7.8e-06|64.7|17/606|TCO89| HM:PFM:REP 484->514|PF10452|5e-07|29.0|31/606|TCO89| OP:NHOMO 27 OP:NHOMOORG 27 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------111111111111111111111111111--------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 298 STR:RPRED 45.6 SQ:SECSTR ###################################################################################################################################################################################################################################################################################################################################HHHHHHHHHHHHcccEEcHHHHHHHHHHcHHHHHHHHccccccGGGccHHHHHHHHHHHHHHHHHHHGGGccEEccEEEcTTccEEEcccccTTTcHHHHTTEEcccEEEccccTTcHHHHHHHHHHHHHTTccGHHHHHHHHHHHHHccccTTHHHHHHHHHGGGccHHHHHHHHHHHHHHHcccGGGEEEccEEEEEEccHHHHHHHHHccccccHHHHHH###HHTTTEEEccTTccHHHHcccHHHHHHHHHHHHHHHHHHHTTTcHHHHHHHHHHHHHHHHHcTTEEEcTTccEEE############################## PSIPRED ccccccccccccccccccccccHHHcccccccccccccccccccccccccccEEEccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccEEccccccccccccccccEEccccccccccccccccccccEEcccccccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccEEEEEEEccccHHHHHHHHHHcccccccccccccccHHHccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccEEEEEHHccccccccccccccEEEEcccccccccccccccEEcccccccccHHHHHHHHHHHccccccccc //