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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01604
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  22/68 : Bacteria  822/915 : Eukaryota  190/199 : Viruses  1/175   --->[See Alignment]
a.80.1c.37.1
:546 amino acids
:PSIPRED
:BLT:PDB   135->335 1sxjB PDBj 3e-11 30.4 %
:BLT:PDB   359->536 2r9gP PDBj 1e-32 48.8 %
:RPS:PDB   135->343 2chgB PDBj 2e-25 27.4 %
:RPS:PDB   368->542 3ctdB PDBj 1e-56 40.5 %
:RPS:SCOP  135->338 1jr3A2  c.37.1.20 * 2e-36 30.4 %
:RPS:SCOP  366->536 2r9gA1  a.80.1.2 * 5e-61 47.5 %
:HMM:SCOP  133->359 1qvrA2 c.37.1.20 * 2.6e-44 34.7 %
:RPS:PFM   131->345 PF05496 * RuvB_N 2e-15 35.2 %
:RPS:PFM   381->536 PF12002 * MgsA_C 7e-53 62.3 %
:HMM:PFM   381->535 PF12002 * MgsA_C 5.4e-60 59.5 153/168  
:HMM:PFM   172->279 PF00004 * AAA 5.9e-16 33.7 101/130  
:BLT:SWISS 15->529 YEG2_SCHPO e-129 53.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01606 GT:GENE CIRG_01604 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 546 SQ:AASEQ MALSLPTQAATMSFECPICGKPVRQSKINSHIDSNCKDFVEVDGNDSSSQPPAPFSDFFQPLSNKSSSKSIPKPNSTRISSQPLPGGKRTLPAEERGAPRSSAHDDAKPVIPAGDLPEHVVKRPRVSNALEKAAPLAERMRPRTLDEVCGQELVGQNGVLRGLIEADRVPSMILWGGAGTGKTTIARVIATMLGSRFVEINSTSSGVAECKKIFAEARNELRLAGRKTIIFCDEIHRFSKSQQDVFLGPVESGQVTLIGATTENPSFKVQNALLSRCRTFTLSKLTDDDIISILNRALELEGPNYSPTNLVDEELIRYLAAFADGDARTSLNLLELAMDLSKRPGMTKDELKKGLTRTLVYDRAGDQHYDTISAFHKSIRGSDPDAALYYLARMIQSGEDPLYIARRLIVVASEDVGLADNSMLPLAVAAYTAVEKIGLPEARINLAHATVALSLSQKSTRAYRALGNAFVALQEPGIAGLPIPIHLRNAPTKLMKGLGYGQEYKYNPDYAGGKVAQTYLPDKLQGRHFLEDHDLGTRVDPDLHKS BL:SWS:NREP 1 BL:SWS:REP 15->529|YEG2_SCHPO|e-129|53.1|471/504| SEG 63->76|snksssksipkpns| BL:PDB:NREP 2 BL:PDB:REP 135->335|1sxjB|3e-11|30.4|191/316| BL:PDB:REP 359->536|2r9gP|1e-32|48.8|168/187| RP:PDB:NREP 2 RP:PDB:REP 135->343|2chgB|2e-25|27.4|201/222| RP:PDB:REP 368->542|3ctdB|1e-56|40.5|158/158| RP:PFM:NREP 2 RP:PFM:REP 131->345|PF05496|2e-15|35.2|196/232|RuvB_N| RP:PFM:REP 381->536|PF12002|7e-53|62.3|154/167|MgsA_C| HM:PFM:NREP 2 HM:PFM:REP 381->535|PF12002|5.4e-60|59.5|153/168|MgsA_C| HM:PFM:REP 172->279|PF00004|5.9e-16|33.7|101/130|AAA| GO:PFM:NREP 3 GO:PFM GO:0006281|"GO:DNA repair"|PF05496|IPR008824| GO:PFM GO:0006310|"GO:DNA recombination"|PF05496|IPR008824| GO:PFM GO:0009378|"GO:four-way junction helicase activity"|PF05496|IPR008824| RP:SCP:NREP 2 RP:SCP:REP 135->338|1jr3A2|2e-36|30.4|194/240|c.37.1.20| RP:SCP:REP 366->536|2r9gA1|5e-61|47.5|162/180|a.80.1.2| HM:SCP:REP 133->359|1qvrA2|2.6e-44|34.7|222/0|c.37.1.20|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 1549 OP:NHOMOORG 1035 OP:PATTERN 111-1---------------11--111-----11111-----1-----1-----111111-------- 1111111111111111111-11111111111111111111111111111111111111--111111111121111111111211-1-1221121112-122222211112--------------21111111111111111111121-11-------111111---21---1121222111111221122112222222222222222311112322212131112222223121111111111111-211111231231233344113321122211111111112222222222212211111111111112112221111222211111111113111111-1211112221111121112111112212111111111111111111111111111111111111-11111111111-111111111111112111111111112111111111111111111-1---1----------------------11211111111111111111111211111112111211111111121111111121112222222222222122212221133221222321212212231111111211-1111111121221212111-1111112122121211111111211121121112--1121211----11111111111111111-1111111111111111111111221111111111111111111111111112-1111111111111--21111111112212111121211111111122222221111222222222222222222222122222211111111111111112222211211111112112222--------1-221--1-211121----111-111113313121222122 2211211-2--21113323222224322234232221222222222322224341112332322323334223343333424432222-343312-23231223211241424232212112313523-6C3-315222142253112113213153422232221212191122211--1111153223211242321 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- PSIPRED cccccccccccccEEcccccccccHHHHHHHHHcccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccHHHHcHHHHHccccHHHHHcHHHHHcHHHHHHHHHcccccEEEEEccccccHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHcccccccEEEEEEcHHHccHHHHHHHHHHHHcccccEEEEEEcccHHHccHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHccccccccccccccccEEHHHcccHHHccccEEccccccccccHHHccc //