[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01607
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  112/199 : Viruses  0/175   --->[See Alignment]
a.39.1
:285 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   108->283 3fwcM PDBj 3e-22 41.3 %
:RPS:PDB   109->283 3bxkC PDBj 4e-12 29.1 %
:RPS:SCOP  109->283 1a29A  a.39.1.5 * 8e-12 32.4 %
:HMM:SCOP  109->283 1wdcB_ a.39.1.5 * 5.4e-27 46.0 %
:HMM:PFM   116->143 PF00036 * efhand 8.5e-08 39.3 28/29  
:HMM:PFM   221->248 PF00036 * efhand 3.9e-07 32.1 28/29  
:BLT:SWISS 108->282 CETN3_MOUSE 3e-23 45.1 %
:PROS 125->137|PS00018|EF_HAND_1
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01609 GT:GENE CIRG_01607 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 285 SQ:AASEQ MASSSTHPSFPPRSSYAAGKLPDRSGLNPTPLPFGSSAALSRRDRAGDYGGEGSGGGPAMGLGKASTHGSVMVQGHGAQQHGLQSHQGNPTGGLSGAASGGNNNPLSDLSEEQREEINEAFTLFDLDRDRHLDYHELRVALRALGFTLSKPDLISLLTTYGVPRPTAAPGGTNQPNQSQQSSRQPQPSQQPPPHPSSLLMPLSSFQTITARKILERDPREEILRAFELFDEGGKGYIDLEDLRRVARELGETGLEEEELRAMIEEFDLEGVGGVTREGFVGICLQ BL:SWS:NREP 1 BL:SWS:REP 108->282|CETN3_MOUSE|3e-23|45.1|142/167| PROS 125->137|PS00018|EF_HAND_1|PDOC00018| SEG 47->63|gdyggegsgggpamglg| SEG 92->107|gglsgaasggnnnpls| SEG 174->204|qpnqsqqssrqpqpsqqppphpssllmplss| SEG 248->265|elgetgleeeelramiee| BL:PDB:NREP 1 BL:PDB:REP 108->283|3fwcM|3e-22|41.3|143/148| RP:PDB:NREP 1 RP:PDB:REP 109->283|3bxkC|4e-12|29.1|141/142| HM:PFM:NREP 2 HM:PFM:REP 116->143|PF00036|8.5e-08|39.3|28/29|efhand| HM:PFM:REP 221->248|PF00036|3.9e-07|32.1|28/29|efhand| RP:SCP:NREP 1 RP:SCP:REP 109->283|1a29A|8e-12|32.4|142/144|a.39.1.5| HM:SCP:REP 109->283|1wdcB_|5.4e-27|46.0|137/142|a.39.1.5|1/1|EF-hand| OP:NHOMO 119 OP:NHOMOORG 112 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1111----1--1111-11111111111111-11111111111111111--------1-----1---11-111-1111--1-----111-12111111111111------12111-1111--1-111-11151-111---11-11111-1111-111-1-1-11-1--------11--------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 178 STR:RPRED 62.5 SQ:SECSTR ###########################################################################################################HccHHHHHHHHHHHHHHcTTccccccHHHHHHHHHHTTccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcTTccccEEccEEEccccHHHHHHHHHHHccGGGHHHHHHHHHHHcTTcccEEcHHHHHHHHHHHTTccccHHHHHHHHHHHcccccccEEHHHHHHHTHT DISOP:02AL 285-286| PSIPRED ccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccHHHcccccHHccccccccHHHcccccccccccccccccccHHHHcccHHHHHHHHHHHHHHcccccccEEHHHHHHHHHHHcccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHccccccHHHHHHHHHHHcccccccccHHHHHHHHHHcccccccHHHHHHHHHHHcccccccccHHHHHHHHcc //