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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01614
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  86/199 : Viruses  0/175   --->[See Alignment]
b.7.1
:1021 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   490->592 1dsyA PDBj 1e-08 35.1 %
:RPS:PDB   488->620 1djgA PDBj 7e-16 16.3 %
:RPS:PDB   718->821 1bdyA PDBj 3e-06 10.5 %
:RPS:SCOP  487->621 1wfjA  b.7.1.2 * 2e-15 21.5 %
:RPS:SCOP  704->823 1wfjA  b.7.1.2 * 7e-10 16.3 %
:HMM:SCOP  408->622 1dqvA2 b.7.1.2 * 7.3e-22 32.2 %
:HMM:SCOP  667->828 1wfjA_ b.7.1.2 * 4.7e-14 25.0 %
:RPS:PFM   492->580 PF00168 * C2 8e-10 40.7 %
:HMM:PFM   492->580 PF00168 * C2 5.4e-16 37.8 82/85  
:HMM:PFM   719->785 PF00168 * C2 2.8e-05 17.9 67/85  
:HMM:PFM   2->55 PF00277 * SAA 0.00039 35.8 53/103  
:BLT:SWISS 78->1005 MU190_SCHPO 0.0 41.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01616 GT:GENE CIRG_01614 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 1021 SQ:AASEQ MATQRKPGGYWSAENPIPTIQQFLESLDKDKQDRDRKIDESGRSQAREQKHRGRYQDIEAAPHKPAPAAKNRRRTVTDPTTGREIEIDDVGIEHMKAVEAPKITVPNANLGLPTAAQTRPDQPLREYKYKQDITAPPDPIAEGTTSDVPIHGEKTNILFHPTPSISYEPMFKSLEKRGGFLCAAIFWAILIIGKLAGGALKWLIPLSACVASGVWLWIQDVIRKGRKHEWSAEQLRGQTATANLLPESVEWLNSFLEVVWGLMDPEMFAGVADTIEDVMQASVPGIIENVRVAEIDQGSNPFRILSLRSLPESHATDLAEGMREHNLKTKSVEETTAEEEGGDTYTLECSFAYHAKPTGNTSSAKAENMHMMLVFYLGVKGLFGVPLPIFAELIEVVGTVRLRVQLTPQPPYAKTLTFSLMGLPHVRAGCVPMVRHGVNILNLPLISNFVNYAIGAAASLYVAPKSMTLDLAQMLQGDDIQKDTLAMGILWVRVHRAVGLSKQDKRGSYGGGSDPYINLSFSKYGKPMYCTRVICDDLNPVWEEGAGILVTPEIIKANEQLSVELWDSDRNTADDIVGKVEISVQKMMEHPSKMYPMVSKLCGMDAGSEMPGELHWEVGYFGKPRMRRELRTDGKNKNLPENLKGHPQLRDEIGSILNDEQDAVMHTPPDPLWPSGICSIVVHQIVNLQFARIKGTLGNRKGNEYDPAREYGENTDEEGKNLPTSYCMIMLNDQLVYRTRAKAVSSKPIFNAGTERFIRDWRSAIITIAVRDQRYREHDPILGVVPLKLSEILHARSQVTRWYPLDGGIGYGRIRVSLLFRSVETQLPRHMLGWDVGTFEVVSGGITAKGFNHHVKVKLRTSGSATSISRSACHGMQDGGGVYIDLGSEESKRNTRLPVQHRYRSAVVVELPSGSTTGYSVIWLQDIADNEDAALDIPIWITKNPQRLTQNYIKEDNWEQKRSPGLEDLTIAGRLQLSCRFAPGFSEVHERLIADNNLRETFEAWEACIAEASETFYDTTQ BL:SWS:NREP 1 BL:SWS:REP 78->1005|MU190_SCHPO|0.0|41.5|909/1188| TM:NTM 2 TM:REGION 178->199| TM:REGION 201->222| SEG 28->39|dkdkqdrdrkid| SEG 60->70|aaphkpapaak| SEG 329->346|tksveettaeeeggdtyt| BL:PDB:NREP 1 BL:PDB:REP 490->592|1dsyA|1e-08|35.1|97/137| RP:PDB:NREP 2 RP:PDB:REP 488->620|1djgA|7e-16|16.3|123/513| RP:PDB:REP 718->821|1bdyA|3e-06|10.5|99/123| RP:PFM:NREP 1 RP:PFM:REP 492->580|PF00168|8e-10|40.7|81/85|C2| HM:PFM:NREP 3 HM:PFM:REP 492->580|PF00168|5.4e-16|37.8|82/85|C2| HM:PFM:REP 719->785|PF00168|2.8e-05|17.9|67/85|C2| HM:PFM:REP 2->55|PF00277|0.00039|35.8|53/103|SAA| RP:SCP:NREP 2 RP:SCP:REP 487->621|1wfjA|2e-15|21.5|121/136|b.7.1.2| RP:SCP:REP 704->823|1wfjA|7e-10|16.3|119/136|b.7.1.2| HM:SCP:REP 408->622|1dqvA2|7.3e-22|32.2|143/145|b.7.1.2|1/2|C2 domain (Calcium/lipid-binding domain, CaLB)| HM:SCP:REP 667->828|1wfjA_|4.7e-14|25.0|132/0|b.7.1.2|2/2|C2 domain (Calcium/lipid-binding domain, CaLB)| OP:NHOMO 179 OP:NHOMOORG 86 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------112333321111111222322222132242222222333333223223331-1-12--11---1--------1111-34133213222214444-------------------------------------------------11-----------------------------231311------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 356 STR:RPRED 34.9 SQ:SECSTR ###############################################################################################################################################################################################################################################################################################################################################################################################################################################################################cGGGccTTccccTTcccccTTcccEEEEEEEEEEEcccccccTHcccccccEEEEEEEEccTEEEEcccccccccccEEEEEEEEEEccGGccTGcEEEEEEEEcccccccEEEEEEEEEGGGcccEEEEEEEEcTTccEEETccEEEEEEEEEEEEcGccccccccEEEEEEEEEEccccccccEEEEEEEEEccccEEEEEccccTTcccEEEEEEEEEEEccccccc##cc######EEcETTTEEEEEEEEEEccccEEEEEEEEccEEEccccTTcccccEEEEEEEEEEccGGGcEEEEEEEEcccccccEEEEEEEEEGGGHcccEEEEEEEEcTTcEEEEEEEEEEEEEEcEEEEE################################################################################################################################################################################################## PSIPRED cccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccHHccccccccccccccccccHHHHHccccccccccccccEEEEEcHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHEEEEEEEEccccccEEEEEEEccccHHHHHHHccHHHcccccccccccHHHccccEEEEEEEEEEcccccccccHHHHccEEEEEEEEEEccccccccEEEEEEEEEEEEEEEEEEEEccccccEEEEEEEEccccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEccHHHHccccccccccccEEEEEEEEEEcccccccccccccccccccEEEEEEcccccEEEEEEEEEccccccEEEEEEEEEcccccccccEEEEEEEEccccccccEEEEEEEEHHHHHccccccEEcHHHccccccccccccEEEEEEEEEccccccHHHHcccccccccHHHcccccccccccccccccccccccccccccccccEEEEEEEEcccccccccccccccccccccccccHHHHHHHcccccccccEEEEEEccEEEEEEEEEEEcccccccccEEEEEccccccEEEEEEEEccccccccEEEEEEEEHHHHccccccccEEEEcccccccEEEEEEEEEEEEEEEEcccccccEEEEEEEccccEEEEcccccccEEEEEccccccEEEEEEcccccccEEEEEccccccccEEEEEEcccccccEEEEEEcccccEEEEEEEcccccccccEEEEEEEEccccccEEEEEEccccccccccccccccEEEEEEEEEEEEEccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccc 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