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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01620
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  126/199 : Viruses  0/175   --->[See Alignment]
c.55.1
:608 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   38->443 3ikoH PDBj 1e-08 27.1 %
:RPS:PDB   56->441 3bg0B PDBj 1e-27 22.2 %
:RPS:SCOP  59->135 1bdgA2  c.55.1.3 * 2e-04 25.3 %
:RPS:PFM   125->443 PF12110 * Nup96 4e-49 42.4 %
:HMM:PFM   126->442 PF12110 * Nup96 2.2e-92 43.9 285/290  
:BLT:SWISS 14->516 NUP98_HUMAN 6e-35 28.5 %

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01622 GT:GENE CIRG_01620 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 608 SQ:AASEQ MLTNPEIILYKLGDMKENQDALLLQKARSVIQIIDDVPSASLSVADFLALIDVVQEESPEGELERRVWQLAYILFNDDIEDDISAGVPEHFRKQYLHRIKKDRLSLLWEDIIRQTHGANVEASATAEERAIRYLCLHRVEDACKALIEGGNPHLATLISQAGRDETIRKDMKDQIEFWRNQNVLSEMTEPIRALYELVAGNCLRSEGKPNAAIEDRTSTFSISERFGLDWVQAFGLRLWYGIGESDSIEAAVSLFQHDISHGNEPAYPTSIFGDRREQPGADLPESPLWVILKIFAVAKYNGKHPEIQPICVPRDIMPEAFSAQGLHSRLSFQLFHHICKVARQYNALEIDEHRADQLALNYAWELAASEEYGPALFVLLYLNRAVDRERSIKEMLCQFAELLPAPVLEDETTSVMWKYLTQELRLPTPWIWAAKALFARSAGVTPTEVGCLLNARHWDEAHDTFCRVVAPRLVIERDYDTLKLLLDVFGKTPERRIRGWPQEGGLYRDFLALVDVPGIRKDQAVLKRLTSTLINAGEKIEKSTTVPFEEKVALKEIGRLVAGWCTNDIGSTLQPADILRLPMTQDARRIHAAEVSKRYYRAIMASGA BL:SWS:NREP 1 BL:SWS:REP 14->516|NUP98_HUMAN|6e-35|28.5|471/1729| BL:PDB:NREP 1 BL:PDB:REP 38->443|3ikoH|1e-08|27.1|336/420| RP:PDB:NREP 1 RP:PDB:REP 56->441|3bg0B|1e-27|22.2|325/423| RP:PFM:NREP 1 RP:PFM:REP 125->443|PF12110|4e-49|42.4|288/290|Nup96| HM:PFM:NREP 1 HM:PFM:REP 126->442|PF12110|2.2e-92|43.9|285/290|Nup96| RP:SCP:NREP 1 RP:SCP:REP 59->135|1bdgA2|2e-04|25.3|75/237|c.55.1.3| OP:NHOMO 155 OP:NHOMOORG 126 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----111-------1-111111111-1111211111111111111111111111111111111--------1-1------------11-12111111111111----1-12-111-21111111111-14B2-332-11131111111111-1--11-----11---1122--11----------112111----111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 393 STR:RPRED 64.6 SQ:SECSTR #####################################ccEEEEcccTTGGGTTccTTccTTcHHHHHHHHHHHHT#cccccccccccHHcHHHHHHHHHHHHHHHHHHTTTcHHHHHTTTTTcccHHHHHHHHHHTTcHHHHHHHHHHTTcHHHHHHHHHTTcccHHHHHHHHHHHHTTccc##ccccHHHHHHHHHHHc####cccccTTccccccTTccGGGGGTccHHHHHHHHHHTcccccccHHHHHHHHHHH#HHHTTccccT##cHHHHHHccccTTHcHHHHHHHHHHccTTHHccHHHHHHHTTccTTccHHHHHHHHHHHHTTTcccccHTTccTccccccHHHHHHHHHHHHHHHHHTTcHHHHHHHHTTcccHHHHHHHHHHHHHHHTGGGGccHHH###cTTTTccHHHHTTccHHHHHHHHHHHHHHHH##################################################################################################################################################################### DISOP:02AL 608-609| PSIPRED ccccHHHHHHHccccHHccHHHHHHHHHHccEEEcccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHcccHHHHccccccccccccccccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccccccccccHHHHHcccccccccccHHHHHHHHHHcccccccccHHcccHHHccHHHcccccccHHHHHHHHHHHHHHHHHccHHHccHHHHHHHHHHHHHHHHHcccccHHHHHEEEcccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccc //