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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01641
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  6/68 : Bacteria  86/915 : Eukaryota  101/199 : Viruses  0/175   --->[See Alignment]
c.8.7
:240 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   12->227 2c5qF PDBj 6e-15 34.2 %
:RPS:PDB   15->202 3c8oB PDBj 9e-27 23.1 %
:RPS:SCOP  94->200 1j3lA  c.8.7.1 * 3e-09 29.5 %
:HMM:SCOP  11->198 1nxjA_ c.8.7.1 * 9.6e-33 34.6 %
:RPS:PFM   94->197 PF03737 * Methyltransf_6 4e-16 38.2 %
:HMM:PFM   54->197 PF03737 * Methyltransf_6 1.1e-23 29.1 127/154  
:BLT:SWISS 11->233 DLPA_LEGPH 6e-19 28.6 %

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01644 GT:GENE CIRG_01641 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 240 SQ:AASEQ MSTLTEEKLAILQQFSACDVSDALMKAEKVPKGAPAHGGFLADLGPLILSPSSTSSKTIAPISTVQFIPKAQPFLHIAQQDPERHGFPEATHWVDHTQRDTIVLLDQPEGQKCAVLGGIMAARMSVIGAKGVIVNGRVRDMAELKASGLPIWARGQSTVGTGAEAKPGARNVPISVSGVAVSPGDIAFCDPLEGVVVIPQDLLDDVLALMPKLVEADDRVKEDVLNGCTVFDAFKKHRGA BL:SWS:NREP 1 BL:SWS:REP 11->233|DLPA_LEGPH|6e-19|28.6|199/615| BL:PDB:NREP 1 BL:PDB:REP 12->227|2c5qF|6e-15|34.2|193/229| RP:PDB:NREP 1 RP:PDB:REP 15->202|3c8oB|9e-27|23.1|156/161| RP:PFM:NREP 1 RP:PFM:REP 94->197|PF03737|4e-16|38.2|102/150|Methyltransf_6| HM:PFM:NREP 1 HM:PFM:REP 54->197|PF03737|1.1e-23|29.1|127/154|Methyltransf_6| RP:SCP:NREP 1 RP:SCP:REP 94->200|1j3lA|3e-09|29.5|105/164|c.8.7.1| HM:SCP:REP 11->198|1nxjA_|9.6e-33|34.6|156/156|c.8.7.1|1/1|RraA-like| OP:NHOMO 247 OP:NHOMOORG 193 OP:PATTERN -------------------------------------11111---------1---------------- --2-1-------------------12-----1----------------------1--1----1--1-1--------------1-------------------------------------------------------------11-------------1-----------------------11---1--1-----------------11--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------221--112111----------2------1--2---1--21-1131-11------11111-----------1--------------------------------------12---21-4---11-1----1111-----1--121-1-----1----131-44-----------------------------------1-----------------------------------------------------1-1----------------------------------------------------------1-----------1----1-----------------1------------------------------1111---------------------------------------1-1----122------------------------------------------------------------------------------------------------- ------------11122111111332111121111111111111112113134411111111111111111111111111111111---11121111221121111----------------------------------------------------------------------11--1--12----1----3212- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 234 STR:RPRED 97.5 SQ:SECSTR ####HHHHHHHHHTccHHHHHHHcHHHHccTHHccTTTTTTcEEcccccEEccccccEEEEEEEEEcccccHHHcccccGGGccHHHHHHHHHTTccccTEEEEEEcTTccccccccHHHHHHHHHTTccEEEEEEEEccHHHHTTcccEEEEEEEcccccTccccccEEcccEEETTEEEcTTcEEEEcTcccEEEEccccccHHHHHHHHHHHHHHHHHHHHHTTccHHHHHHHHH## PSIPRED cccccHHHHHHHcccccccHHHHHHHcccccccccccccEEcccccEEEcccccccEEEEEEEEEEEEcccccccccccccccccccHHHHHHHHHcccccEEEEEcccccccEEHHHHHHHHHHHcccEEEEEEcEEccHHHHHHccccEEEccccccccccccEEEEEccEEEEccEEEccccEEEEEccccEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccc //