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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01665
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  20/915 : Eukaryota  91/199 : Viruses  0/175   --->[See Alignment]
a.102.1b.3.1
:628 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   45->604 2vn4A PDBj e-169 53.7 %
:RPS:PDB   45->492 1agmA PDBj 5e-72 62.3 %
:RPS:PDB   516->606 1cqyA PDBj 3e-18 23.6 %
:RPS:SCOP  45->492 1agmA  a.102.1.1 * 2e-73 62.3 %
:RPS:SCOP  517->604 1a47A2  b.3.1.1 * 3e-25 29.9 %
:HMM:SCOP  17->466 2fbaA1 a.102.1.1 * 7e-145 43.7 %
:HMM:SCOP  512->605 1kulA_ b.3.1.1 * 4.2e-28 45.7 %
:RPS:PFM   66->255 PF00723 * Glyco_hydro_15 5e-05 26.9 %
:RPS:PFM   520->607 PF00686 * CBM_20 9e-22 50.0 %
:HMM:PFM   45->455 PF00723 * Glyco_hydro_15 7.2e-102 28.2 400/448  
:HMM:PFM   518->608 PF00686 * CBM_20 2.3e-33 46.2 91/97  
:BLT:SWISS 44->604 AMYG_ASPOR 0.0 54.3 %
:PROS 203->213|PS00820|GLUCOAMYLASE
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01668 GT:GENE CIRG_01665 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 628 SQ:AASEQ MMLSILRALYAVPLVYSLVSGSEAKFALRQEETLEQWLETESSYALQSILDNIGDDGAKVQGAHAGIVVASPSRADPDYFYTWTRDAALVFKHLIDAFVAGNHDSQDRIHEYITAQSYLQTVSNPSGTLSTGGLGEPKFHVDQSAFTGSWGRPQADGPALRATAMITYAKWLIANGHEDAAKSIVWPVVQNDLSYVGQFWNSTGFDLWEEVQGSSFFTAIAQHRALAEGNNLARQLGTDCPHCESQAPQILCFLQSFWTGSNIIANFGGDRSGLDANSLLGIIHNFDPEADCDDNTFQPCSSRALANHKKVTDSFREIYPINSGMEGDQAVAVGRYAEDVYYGGQPWYLATFASAELLYDAIYQWNHTGKITITDVSLPFFQSIYKSAQVGTYSSSTNVFSEIIANVGSYADGYLNVARKYTPCSGALAEQFSRNDGTPLSASDLTWSYAALLTAKERRESVVPGSWGQKSAHDVPPTCLATSAAGSYQTATITGWPSTLTPTPTPTNPAPCPTPSSVKITFQSVTDTKWGENIFLVGSIPELGSWEPSAAKQLKADKYEASCPLWSIQIDLAAGKKFDYRYIRKSDDGRVVWESDPNRSYTVPKNLEYQRRPSSSPAIQQRAKLPPH BL:SWS:NREP 1 BL:SWS:REP 44->604|AMYG_ASPOR|0.0|54.3|558/612| PROS 203->213|PS00820|GLUCOAMYLASE|PDOC00646| TM:NTM 1 TM:REGION 1->23| SEG 30->43|qeetleqwletess| SEG 494->515|tgwpstltptptptnpapcptp| BL:PDB:NREP 1 BL:PDB:REP 45->604|2vn4A|e-169|53.7|557/599| RP:PDB:NREP 2 RP:PDB:REP 45->492|1agmA|5e-72|62.3|448/470| RP:PDB:REP 516->606|1cqyA|3e-18|23.6|89/99| RP:PFM:NREP 2 RP:PFM:REP 66->255|PF00723|5e-05|26.9|182/402|Glyco_hydro_15| RP:PFM:REP 520->607|PF00686|9e-22|50.0|86/92|CBM_20| HM:PFM:NREP 2 HM:PFM:REP 45->455|PF00723|7.2e-102|28.2|400/448|Glyco_hydro_15| HM:PFM:REP 518->608|PF00686|2.3e-33|46.2|91/97|CBM_20| GO:PFM:NREP 4 GO:PFM GO:0004339|"GO:glucan 1,4-alpha-glucosidase activity"|PF00723|IPR011613| GO:PFM GO:0005976|"GO:polysaccharide metabolic process"|PF00723|IPR011613| GO:PFM GO:0003824|"GO:catalytic activity"|PF00686|IPR002044| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF00686|IPR002044| RP:SCP:NREP 2 RP:SCP:REP 45->492|1agmA|2e-73|62.3|448/470|a.102.1.1| RP:SCP:REP 517->604|1a47A2|3e-25|29.9|87/105|b.3.1.1| HM:SCP:REP 17->466|2fbaA1|7e-145|43.7|444/0|a.102.1.1|1/1|Six-hairpin glycosidases| HM:SCP:REP 512->605|1kulA_|4.2e-28|45.7|94/0|b.3.1.1|1/1|Starch-binding domain-like| OP:NHOMO 192 OP:NHOMOORG 111 OP:PATTERN -------------------------------------------------------------------- ----1--------------------------------------------------------2--1----11------------------------------------------------------------------11-----1-------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------1-------------------------------1------------------1---------------------------------------11----1-------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111-------------------------------------------------------------------------------------------------------------------------------------------------- ------1-----111434344672225--111111111211111114411222244222233111111111-11111-1111111111-22533211111231223-----------------------------------------------------------------------------------3--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 577 STR:RPRED 91.9 SQ:SECSTR ############################################HHHHHHTTcTTTcTTcTTccTTcccccccccccccccEEHHHHHHHHHHHHHHHHTTcGGGHHHHHHHHHHHHHHHHcccTTccTTTTGGGccEEcTTccccccccccccTHHHHHHHHHHHHHHHHHHHTTcHHHHHHTHHHHHHHHHHHHHHHTTccEEcTTcccEEEEHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHGGGccccccccEEccccccccTHHHHHHHTcccTTccccTTTTcTTcHHHHHHHHHHHHTTTTTcGGGTTccTTccccccccTTccGGGccccHHHHHHHHHHHHHHHHHHHHHTEEEEcTTTHHHHHHHcTTcccEEEETTcHHHHHHHHHHHHHHHHHHHHHHHHccTTcccccEEcTTTccEEcccccHHHHHHHHHHHHHHTTcccccccGGGcccccccccccccccccccccccccccTTccccccccccccccccEEEEEEEEcccccTTEEEEEEEccGGGTTTccccccEEcEEccETTTTEEEEEEEEETTccEEEEEEEEETTccEEEccccEEEcccccc###EEEEEETTEEEEccc#### PSIPRED cEEcHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHcccccccEEEEEEcccccccEEEEHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHEEEcccccccccccccccccEEEccccccccccccEEEcccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccEEEEEccccccccHHHHHHHHccccHHHcccccccccccHHHHHHHHHHHHHHHHcccccccccccccEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEccccccccccccHHHHHHHHHcccccccccccccccccccccccEEEcccEEccccccccccEEccccccccccccccccccccEEEEEEEEEEEcccccEEEEEccHHHHccccHHHcccccccccccccccEEEEEEEccccEEEEEEEEEcccccEEEEcccccEEEEcccccccccccccHHHHHHcccccc //