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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01678
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  39/915 : Eukaryota  195/199 : Viruses  0/175   --->[See Alignment]
a.158.1b.69.13b.69.2b.69.4
:887 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   284->657 1p22A PDBj 7e-38 41.7 %
:RPS:PDB   294->576 3ei3A PDBj 4e-26 7.6 %
:RPS:SCOP  85->183 2ovpB1  a.158.1.1 * 9e-12 23.2 %
:RPS:SCOP  265->335 1sqjA1  b.69.13.1 * 1e-06 6.8 %
:RPS:SCOP  308->337 1nr0A1  b.69.4.1 * 1e-06 25.0 %
:RPS:SCOP  320->573 1pguA1  b.69.4.1 * 4e-22 17.4 %
:HMM:SCOP  93->290 1p22A1 a.158.1.1 * 8.7e-21 33.3 %
:HMM:SCOP  295->570 1p22A2 b.69.4.1 * 2.4e-55 35.7 %
:HMM:SCOP  474->682 2madH_ b.69.2.1 * 1.5e-13 28.8 %
:RPS:PFM   59->120 PF03448 * MgtE_N 8e-05 32.3 %
:RPS:PFM   106->142 PF00646 * F-box 6e-05 48.6 %
:HMM:PFM   305->335 PF00400 * WD40 1.5e-09 38.7 31/39  
:HMM:PFM   346->379 PF00400 * WD40 1.5e-07 34.4 32/39  
:HMM:PFM   388->421 PF00400 * WD40 1.9e-08 30.3 33/39  
:HMM:PFM   476->509 PF00400 * WD40 7.8e-09 32.4 34/39  
:HMM:PFM   513->549 PF00400 * WD40 2.7e-09 40.5 37/39  
:HMM:PFM   104->146 PF00646 * F-box 2.4e-10 32.6 43/48  
:HMM:PFM   672->845 PF04652 * DUF605 4.3e-05 19.2 167/383  
:HMM:PFM   79->121 PF03448 * MgtE_N 0.00019 27.9 43/102  
:BLT:SWISS 83->147 FBXL5_MOUSE 9e-06 39.0 %
:BLT:SWISS 254->570 POF11_SCHPO 2e-43 38.3 %
:PROS 322->336|PS00678|WD_REPEATS_1
:PROS 496->510|PS00678|WD_REPEATS_1
:REPEAT 3|300->339|474->513|514->553
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01681 GT:GENE CIRG_01678 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 887 SQ:AASEQ MDHDPTDPAGAPPLGKLQSDKYKGGLGAPSNSFRLDEGYSDETKSEAGNDGPLGNGFTLPPWLLSHTEPVRADLAFALLSTLRTSTIANIVERLTPLLHMDPVQKLPPEITAEIFSYLDPTTLLTASLASRAWRDRIQDSLLWRKLYLQEGWKVNMEEVRTFQRQRAESMQSALRKVRMRRSDTEFGQPLQKRRVLPGRTNSTGSSVSMVEGDASNSAMCRPADAGGDYEMQDVGNIDNSAGCPPLDRDLPLTPYKEAFLSPALCADDPTRLNWVYLYRQRRILEDNWLNGRFKNFQLPHPLYPWEAHRECIYAIQFSGNWLVSSSRDRTIRIWNLETRRLRYPPLLGHKGSVLCLQFDASEEEDIIISGSSDRNVIIWRFSTGEKLQILSNAHLDSVLSLRFDKRYLVTCSKDKLIKVWNRQELSPSDEDYPKYFTGVGVRYPPYIVDTSSMSPSTLEAQIANEHIKTLQPYSLLMTLDGHGAAVNSIQIDKNEIVSASGDRLIKVWDIHSGSCLKTLVGHQKGIACVQFDSKRIISGSNDLTVRIYDHASGAEVACLLAHEDLVRTLQAGFGDPPGSEETMRLEAMAVDHDYWEAQRRGDVRHETGRRRVNRMRSTGSRRPQDIMALGAKIPPGGGGSRWARIVSGSYDETIIIWKRDKEGKWVVGQRLRQTDAARASSAIDDSMATEFLTQTFGANLPGIHRHLQAATHHPQSNAFAGPSQSTAAVVPSSAQAGASSSIPQPSITAQNAFANQLLQPQSQPQSSAQVSPNAQQAPIPIPQNQATQIPTTGQVQPTALQPQPHQPQPQPQHPALQPPVGPHPTAPTQTNNPGQVPPHHHATARIFKLQFDARKLICASQDHVIVGWDFANGDKYLEEVCRFFESL BL:SWS:NREP 2 BL:SWS:REP 83->147|FBXL5_MOUSE|9e-06|39.0|59/690| BL:SWS:REP 254->570|POF11_SCHPO|2e-43|38.3|269/506| PROS 322->336|PS00678|WD_REPEATS_1|PDOC00574| PROS 496->510|PS00678|WD_REPEATS_1|PDOC00574| NREPEAT 1 REPEAT 3|300->339|474->513|514->553| SEG 359->373|daseeediiisgssd| SEG 675->688|daarassaiddsma| SEG 754->792|anqllqpqsqpqssaqvspnaqqapipipqnqatqiptt| SEG 796->819|qptalqpqphqpqpqpqhpalqpp| BL:PDB:NREP 1 BL:PDB:REP 284->657|1p22A|7e-38|41.7|288/402| RP:PDB:NREP 1 RP:PDB:REP 294->576|3ei3A|4e-26|7.6|278/1105| RP:PFM:NREP 2 RP:PFM:REP 59->120|PF03448|8e-05|32.3|62/103|MgtE_N| RP:PFM:REP 106->142|PF00646|6e-05|48.6|37/45|F-box| HM:PFM:NREP 8 HM:PFM:REP 305->335|PF00400|1.5e-09|38.7|31/39|WD40| HM:PFM:REP 346->379|PF00400|1.5e-07|34.4|32/39|WD40| HM:PFM:REP 388->421|PF00400|1.9e-08|30.3|33/39|WD40| HM:PFM:REP 476->509|PF00400|7.8e-09|32.4|34/39|WD40| HM:PFM:REP 513->549|PF00400|2.7e-09|40.5|37/39|WD40| HM:PFM:REP 104->146|PF00646|2.4e-10|32.6|43/48|F-box| HM:PFM:REP 672->845|PF04652|4.3e-05|19.2|167/383|DUF605| HM:PFM:REP 79->121|PF03448|0.00019|27.9|43/102|MgtE_N| RP:SCP:NREP 4 RP:SCP:REP 85->183|2ovpB1|9e-12|23.2|99/99|a.158.1.1| RP:SCP:REP 265->335|1sqjA1|1e-06|6.8|71/427|b.69.13.1| RP:SCP:REP 308->337|1nr0A1|1e-06|25.0|30/311|b.69.4.1| RP:SCP:REP 320->573|1pguA1|4e-22|17.4|242/325|b.69.4.1| HM:SCP:REP 93->290|1p22A1|8.7e-21|33.3|114/118|a.158.1.1|1/1|F-box domain| HM:SCP:REP 295->570|1p22A2|2.4e-55|35.7|224/0|b.69.4.1|1/3|WD40 repeat-like| HM:SCP:REP 474->682|2madH_|1.5e-13|28.8|146/0|b.69.2.1|2/2|YVTN repeat-like/Quinoprotein amine dehydrogenase| OP:NHOMO 2308 OP:NHOMOORG 236 OP:PATTERN --------------------------------------------------11---------------- --1---------------------------------------11--------------------------1------------------------------------------------------211121111311---3---1-SAB4128------------17NLND--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------1--------------------------------------------------------------------------------------3------------------1-------------------1--------15--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------- 22-1GF9-A44-FFF4988DDA98AE8779B9A997C989889787BJDS9ACI688IAAAB97463814764655515655665488-BNI9DG*8887778MKN1F46WFDCDDF99748D9OE4J6R*J1QGW8558H7AHA6A665EA8Q8HJFTAHMABHA6B76B88PI1695i121349389DA3336778C ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 469 STR:RPRED 52.9 SQ:SECSTR ##########################################################################################################################################################################################################ccGGGcccEEEccccccccccccccEEEEEEEEEEETTTccEEEEEEccTTEEEEEEEccccccEEEEEETGGGTcccccEEEccEEEEEETccEEEEEEccTTEEEEEEEEEccTcccEEEEEEEEccTTccccccEEEEEEEEEEEcccEEEEEEETTEEEEEETEEETTEEEEEEEcTTccEEEEEcEEcccccEEEEETTEEEEEEccccEEEEEEETTTTEEEEccccccEEEEEEEETTEEEEEETTcEEEEEEEcGGGcEEEEEEEEccccEEEEEEcccccccEEEEEEETTccEEEEEEEcHHHHHHHHHHHHHHHHHccHHHHHcEEccccEEccccEEEHHHHHGGGGccHHHHHHHcccccccEEEEEcccccEEEEEcccccccccEEEEEETTTTcccEEEEccccccccTTcccTTccccEEcTTccEEEEcTTcccEEEEEEcTEEEcEEEcc######################################################################################################################################################################################################################## DISOP:02AL 887-888| PSIPRED cccccccHHHccccccccccccccccccccccccccccHHcccccHHccccccccccccHHHHHHHccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccHHHHHHHHHccccccccHHHHHcccccccccccccccccccccccccccEEEEEEcccccEEEEEccccccEEEEEEEccccEEEEEcccccEEEEEEccccEEEEEEEcccccEEEEEEEccccEEEEEEccccEEEEcccccEEEEEEcccccEEEEEEcccEEEEEEccccEEEEEccccEEEEEEEEcccccEEEEEEEccccccEEEEEEccccEEEEEcccccEEEEEEccccccEEEEEEcccEEEEEEcccEEEEEEccccEEEEEEccccEEEEEEEccccEEEcccccccEEEccEEEEEEEEccccEEEEEEEcccccEEEEEEcccEEEEEEccccEEEEEcccccEEEEEEcccccEEEEEEcccEEEEEEcccEEEEEEccccEEEEEEcccccEEEEEEEccccccccccEEEEEEEcccccEEEccccccEEEEcccccEEEEEEcccccccEEEEEEEEEEEccccccccEEEEEEccccEEEEEcccccEEEEEEcccccccEEEEEccccEEEEEEccccEEEccccccccEEEEEEcccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEccEEEEEEccccEEEEEEEcccHHHHHHHHHHHHcc //