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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01680
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  158/199 : Viruses  0/175   --->[See Alignment]
a.87.1b.55.1d.15.2
:909 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   169->426 1rj2A PDBj 1e-17 29.5 %
:BLT:PDB   819->903 2nptA PDBj 5e-05 32.1 %
:RPS:PDB   177->509 1dbhA PDBj 1e-24 13.0 %
:RPS:PDB   808->889 2bkfA PDBj 4e-08 18.4 %
:RPS:SCOP  177->362 1ki1B1  a.87.1.1 * 6e-28 22.7 %
:RPS:SCOP  385->505 1kz7A2  b.55.1.1 * 3e-04 22.1 %
:RPS:SCOP  808->887 2bkfA1  d.15.2.2 * 2e-10 18.9 %
:HMM:SCOP  157->374 1xcgA1 a.87.1.1 * 6.7e-40 28.0 %
:HMM:SCOP  375->505 1ntyA2 b.55.1.1 * 1.2e-18 24.8 %
:HMM:SCOP  794->906 1oeyJ_ d.15.2.2 * 3.9e-19 34.4 %
:RPS:PFM   60->148 PF06395 * CDC24 2e-30 60.7 %
:RPS:PFM   182->355 PF00621 * RhoGEF 8e-15 30.2 %
:RPS:PFM   815->885 PF00564 * PB1 4e-05 33.8 %
:HMM:PFM   60->148 PF06395 * CDC24 1.7e-38 48.3 89/89  
:HMM:PFM   181->354 PF00621 * RhoGEF 6.3e-33 27.7 173/180  
:HMM:PFM   814->906 PF00564 * PB1 1.1e-09 31.6 79/84  
:HMM:PFM   10->96 PF03340 * Pox_Rif 0.00036 23.8 80/541  
:HMM:PFM   395->506 PF00169 * PH 0.001 16.1 87/104  
:BLT:SWISS 16->501,812->880 SCD1_SCHPO 4e-57 31.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01683 GT:GENE CIRG_01680 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 909 SQ:AASEQ MEPVISPGHVMAEDNIINRRGGESLYQSCAHLKKRLAEVPGFEPHLAEMEALDKTQEISDPVASVWRCLQNGYPLMTIFNATQPAEPLTLDESKVQEHRRPKAAAFKFLQACLQDLEFPQQECFLITDLYGENTTGFVKVIKMVNRVLDILEMQGQLYKPSPTNSGPVEQQRTKLTRREHILKEMLETERDYVHHLQNLQALKKELEETGALNGDSSHQIFLNLNNLLDFAQRFLIRMEQHNALPEESQNWGELFINHQEGFRQYEPFIANQLRCDAVCLREWDKIHAAPRSLDLQQMVAQLSTLNGFFVKPFQRLTKYPLMLMELKKQTDREDLSADITTAIDIIQLVLDRANSAIDKEHLAAAVQDLTNRVDDWKALRVEAFGELLRFGTFIVIKGDAGKDSEREYHIYLFQRILLCCKDINPNKQKSKLMGKDKPNPNTQKGKARLQLKGRIYMANVTEILSLQRPGSYKIQIFWKGDPGVVDNFSIRYRDEETMRKWYKDIDAQRALQVEERNTSRSGTSETEFTYLKNAKMQNPYAEEYNADEDLAPAVSELSMSRNASSTSLRARSGTGGSGGSGPPVSRPPRFPMPEPPLSLHTQFSPGALSPGERLAGSYFSPVAEIPSSTRSSSSTTFSYSRQGTPSSQWNEDSNRYTAPAMPRAGSRDGPTSSPYYSNPPRVTQRPSLPPLSSQNPQNPAQSRMRSASSPDIHNHNLPDSARRHLNGHTMQTVDNVPVPPIPANIANMRTPINRSQSSSPGTMPPPQSLRPGFTEPQYAQGRETLRSQPSLTSNPSSLSLNQEVENIMPAQLKAKVNFNDNYVTLVIASNILYRSLTDRVDAKLARFTTRSIGAKSARLRYRDEDGDFVTIDSDEAVQLAIMEWREQHQNMLANGQVGEIQLFCQPVEN BL:SWS:NREP 1 BL:SWS:REP 16->501,812->880|SCD1_SCHPO|4e-57|31.4|539/872| SEG 564->598|sstslrarsgtggsggsgppvsrpprfpmpeppls| SEG 627->640|sstrssssttfsys| SEG 684->703|qrpslpplssqnpqnpaqsr| SEG 787->802|sqpsltsnpsslslnq| BL:PDB:NREP 2 BL:PDB:REP 169->426|1rj2A|1e-17|29.5|237/317| BL:PDB:REP 819->903|2nptA|5e-05|32.1|78/102| RP:PDB:NREP 2 RP:PDB:REP 177->509|1dbhA|1e-24|13.0|315/332| RP:PDB:REP 808->889|2bkfA|4e-08|18.4|76/86| RP:PFM:NREP 3 RP:PFM:REP 60->148|PF06395|2e-30|60.7|89/89|CDC24| RP:PFM:REP 182->355|PF00621|8e-15|30.2|172/179|RhoGEF| RP:PFM:REP 815->885|PF00564|4e-05|33.8|65/83|PB1| HM:PFM:NREP 5 HM:PFM:REP 60->148|PF06395|1.7e-38|48.3|89/89|CDC24| HM:PFM:REP 181->354|PF00621|6.3e-33|27.7|173/180|RhoGEF| HM:PFM:REP 814->906|PF00564|1.1e-09|31.6|79/84|PB1| HM:PFM:REP 10->96|PF03340|0.00036|23.8|80/541|Pox_Rif| HM:PFM:REP 395->506|PF00169|0.001|16.1|87/104|PH| GO:PFM:NREP 3 GO:PFM GO:0005089|"GO:Rho guanyl-nucleotide exchange factor activity"|PF00621|IPR000219| GO:PFM GO:0005622|"GO:intracellular"|PF00621|IPR000219| GO:PFM GO:0035023|"GO:regulation of Rho protein signal transduction"|PF00621|IPR000219| RP:SCP:NREP 3 RP:SCP:REP 177->362|1ki1B1|6e-28|22.7|185/210|a.87.1.1| RP:SCP:REP 385->505|1kz7A2|3e-04|22.1|104/142|b.55.1.1| RP:SCP:REP 808->887|2bkfA1|2e-10|18.9|74/85|d.15.2.2| HM:SCP:REP 157->374|1xcgA1|6.7e-40|28.0|218/0|a.87.1.1|1/1|DBL homology domain (DH-domain)| HM:SCP:REP 375->505|1ntyA2|1.2e-18|24.8|113/121|b.55.1.1|1/1|PH domain-like| HM:SCP:REP 794->906|1oeyJ_|3.9e-19|34.4|96/0|d.15.2.2|1/1|CAD & PB1 domains| OP:NHOMO 1063 OP:NHOMOORG 158 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----442-----214-1111111111111111111222111111111111112121111111111111111111111-1111111111--1111112122112345-5--8RMHLLN32658E7zd6O6v*J6WFa7746R88J84A681J54W9JDFE4463465-E848-232--------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 532 STR:RPRED 58.5 SQ:SECSTR ############################################################################################################ccccTTcccccTTcEEEEEcccccEEEEEccccEEEEEGGGEEEcccccccH####ccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHTHHHHHcTTTccHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHccTTcccHHHHHHHHTTTTHHHHHHHHHHTcTTHHHHHHHHHHHcTTHHHHHHHHcTTHHTHHHHTTHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHTHHHHHHHHHHHcHHHHHHHHHTccTHHHHHHTTEEccccccGGGTcccEEEEEEEETTcccEEEEEEccEEEEEEcTTccccTTcccccEEccccTTcEEEEEEEEGEEEEEEEcccEEEEcccccccccEEEEccTTcccEEEEcccHHHHHHHHHHHHHHTHHHHHHHHHTccccHHHHHHHTTccccccccTTTcGGGc###################################################################################################################################################################################################################################################################ccccEEEEEEETTEEEEEEEccGGGccHHHHHHHHHHTTccccHHTcccEEEEEEcTTccEEEEccHHHHHHHHHHHHHTTTHHHTTTccccEEEE###### PSIPRED ccccccccccccHHHHccccccHHHHHHHHHHHHHHccccHHHHHHHHcccccccccccccHHHHHHHHHccHHHHHHHHHcccccccEEccccccccccHHHHHHHHHHccHHHHcccHHHHccHHHHccccccccEEEEEHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHcccHHHHHcHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEccEEEEEcccccccccEEEEEEEccEEEEEEEccccccccEEcccccccccccccccEEEEcccccHHHHHcccccccccccEEEEEEEcccccEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHEEEEEccccEEEEEEcccccHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccEEEEEccHHHHHHHHHcHHccccccccccccEEEEEEEcccc //