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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01684
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  80/199 : Viruses  0/175   --->[See Alignment]
c.47.1
:385 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  247->382 1f37A  c.47.1.11 * 2e-07 21.2 %
:HMM:SCOP  242->379 1f37A_ c.47.1.11 * 8.7e-12 32.7 %
:RPS:PFM   88->375 PF06999 * Suc_Fer-like 2e-58 61.4 %
:HMM:PFM   87->369 PF06999 * Suc_Fer-like 7.9e-38 32.9 219/230  
:HMM:PFM   64->77 PF01160 * Opiods_neuropep 0.00078 50.0 14/67  
:BLT:SWISS 27->368 APD1_YEAST 3e-18 33.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01687 GT:GENE CIRG_01684 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 385 SQ:AASEQ MASIFRRGLEYLSPSASPAPSSVSDYEATSVPATGKPAVASKVITAQSPSTLFTVVDPTVDGEDCDHDCASCTIKYPAKFSVDYEDELYGHVKGWATHVLVATGKTDWVRDVADEKGSVMEAIERGGVSAKNGALKLSASNIPVPDEYYHHPEGEQPTTVLLLPAFTIIDHVTPALVPNLIRQFVDLSPTTTTPLSDVMQIAGQEEPTEQTPSDINIPERPPLDLKDLSESLPTSLRSRPCSHAAVILLCSQKTRDARCGQSAPLLRREFERHLRPLGLYRDLHDERPGGVGIYFISHVGGHKYSANVIVYRRRNFEWFKEGKDDCSNNVESMEKEGASQGIWLARVRPEDCEGIVKFTVLQGKVVKPGLQLRGGFDREKGLISW BL:SWS:NREP 1 BL:SWS:REP 27->368|APD1_YEAST|3e-18|33.1|275/316| SEG 13->24|spsaspapssvs| RP:PFM:NREP 1 RP:PFM:REP 88->375|PF06999|2e-58|61.4|220/222|Suc_Fer-like| HM:PFM:NREP 2 HM:PFM:REP 87->369|PF06999|7.9e-38|32.9|219/230|Suc_Fer-like| HM:PFM:REP 64->77|PF01160|0.00078|50.0|14/67|Opiods_neuropep| RP:SCP:NREP 1 RP:SCP:REP 247->382|1f37A|2e-07|21.2|99/109|c.47.1.11| HM:SCP:REP 242->379|1f37A_|8.7e-12|32.7|104/109|c.47.1.11|1/1|Thioredoxin-like| OP:NHOMO 161 OP:NHOMOORG 80 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------11112223333424333333333333333333322112223221212122122111111122211111122211----1-2----------222-----------------------------------------------------------------------------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 8-15,17-18,385-386| PSIPRED ccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccHHHccHHHHHcccHHHHHHHHHcccccccccccccccccccccccccccccccccEEEccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEcccccccccccEEEEEccccccccccccccccccccccccccEEEEEEEcccHHHHHHHHHHHHHccEEcccccccccccccccccccc //