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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01685
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  179/199 : Viruses  0/175   --->[See Alignment]
g.37.1g.44.1
:281 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   5->122 2i13B PDBj 5e-29 54.1 %
:RPS:PDB   4->132 1ej6C PDBj 3e-21 11.0 %
:RPS:SCOP  5->108 2g43A1  g.44.1.5 * 7e-19 8.0 %
:RPS:SCOP  79->122 1ncsA  g.37.1.1 * 3e-09 18.2 %
:HMM:SCOP  2->31 1u86A1 g.37.1.1 * 0.00033 33.3 %
:HMM:SCOP  17->74 1x3cA1 g.37.1.1 * 5.8e-17 46.6 %
:HMM:SCOP  62->91 1u86A1 g.37.1.1 * 1.1e-07 63.3 %
:HMM:SCOP  77->122 1x3cA1 g.37.1.1 * 1.4e-10 58.1 %
:HMM:PFM   7->31 PF00096 * zf-C2H2 4.1e-08 56.5 23/23  
:HMM:PFM   37->61 PF00096 * zf-C2H2 3.7e-06 47.8 23/23  
:HMM:PFM   67->91 PF00096 * zf-C2H2 8.3e-07 47.8 23/23  
:HMM:PFM   98->143 PF12131 * DUF3586 4.1e-05 26.7 45/78  
:BLT:SWISS 8->132 ZN271_MOUSE 5e-30 51.7 %
:PROS 9->31|PS00028|ZINC_FINGER_C2H2_1
:PROS 39->61|PS00028|ZINC_FINGER_C2H2_1
:PROS 69->91|PS00028|ZINC_FINGER_C2H2_1
:PROS 99->122|PS00028|ZINC_FINGER_C2H2_1
:REPEAT 4|9->31|39->61|69->91|99->122
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01688 GT:GENE CIRG_01685 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 281 SQ:AASEQ MARTRSFPCPWATCKKVFNRKSDLCRHYRIHTNDRPYHCEFPNCTKSFIQRSALTVHSRTHTGEKPHVCDVPNCRKAFSDSSSLARHRRIHTGKRPYKCLEPTCERSFCRKTTLTKHQHRSHQLELSSQAHCIPQHSPQGIYSQPPSQPPPVLPQTTQNITESLPAYQQAGIMISAAEFYPSQTQPVHAIPVAAENTVLDPEIQYVGSGMVMQPQIQRFDVTPIESLTRFQPIPPNIVPHFEALAPAPYGGVFPLDNKPLGPRILDPYPERGNFDFLGLEG BL:SWS:NREP 1 BL:SWS:REP 8->132|ZN271_MOUSE|5e-30|51.7|116/580| PROS 9->31|PS00028|ZINC_FINGER_C2H2_1|PDOC00028| PROS 39->61|PS00028|ZINC_FINGER_C2H2_1|PDOC00028| PROS 69->91|PS00028|ZINC_FINGER_C2H2_1|PDOC00028| PROS 99->122|PS00028|ZINC_FINGER_C2H2_1|PDOC00028| NREPEAT 1 REPEAT 4|9->31|39->61|69->91|99->122| SEG 137->155|spqgiysqppsqpppvlpq| BL:PDB:NREP 1 BL:PDB:REP 5->122|2i13B|5e-29|54.1|109/144| RP:PDB:NREP 1 RP:PDB:REP 4->132|1ej6C|3e-21|11.0|127/1221| HM:PFM:NREP 4 HM:PFM:REP 7->31|PF00096|4.1e-08|56.5|23/23|zf-C2H2| HM:PFM:REP 37->61|PF00096|3.7e-06|47.8|23/23|zf-C2H2| HM:PFM:REP 67->91|PF00096|8.3e-07|47.8|23/23|zf-C2H2| HM:PFM:REP 98->143|PF12131|4.1e-05|26.7|45/78|DUF3586| RP:SCP:NREP 2 RP:SCP:REP 5->108|2g43A1|7e-19|8.0|100/117|g.44.1.5| RP:SCP:REP 79->122|1ncsA|3e-09|18.2|43/47|g.37.1.1| HM:SCP:REP 2->31|1u86A1|0.00033|33.3|30/0|g.37.1.1|1/4|C2H2 and C2HC zinc fingers| HM:SCP:REP 17->74|1x3cA1|5.8e-17|46.6|58/0|g.37.1.1|1/2|C2H2 and C2HC zinc fingers| HM:SCP:REP 62->91|1u86A1|1.1e-07|63.3|30/0|g.37.1.1|3/4|C2H2 and C2HC zinc fingers| HM:SCP:REP 77->122|1x3cA1|1.4e-10|58.1|43/0|g.37.1.1|2/2|C2H2 and C2HC zinc fingers| OP:NHOMO 29706 OP:NHOMOORG 179 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----226-----96G77879A9A997B7889779887666487667888A878A6986889868756838A89578A59979999855-9967BA77579669aZl1B72**********************y**************************************cm*S---5V-1---35B6936--JJJI- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 136 STR:RPRED 48.4 SQ:SECSTR ccHccccccccTTTccccccHHHHHHHHGGGTccccccTTEccccccEEEEETTcccEEEcccccccccEEHHccccccEEEEEEEcccccccccEEEETTEEEEcccccccccEEEEcTTcccccccccccHHHT################################################################################################################################################# PSIPRED ccccccccEEEcccccEEcccccccEEEEEccccccccccccccccEEcccccccEEEEEcccccccccccccccccccccccccEEEEEccccccEEEcccccccEEcccccccccccEEccccccccccHHcccccccEEEEEccccccEEccHHHHHHcccccccHHHHHcccccccccccccccccccHHHHHccccHHEEEcccccccccEEEEccccHHHcccccccccccccccHHcccccccccccccccccccccccccccccccccccccc //