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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01759
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  193/199 : Viruses  0/175   --->[See Alignment]
:347 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   10->293 2r51A PDBj 7e-98 62.0 %
:RPS:PDB   15->269 1cf1B PDBj 5e-30 13.7 %
:RPS:PFM   18->279 PF03643 * Vps26 e-106 69.8 %
:HMM:PFM   6->279 PF03643 * Vps26 1.7e-131 61.3 274/275  
:BLT:SWISS 4->293 VPS26_SCHPO e-114 62.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01762 GT:GENE CIRG_01759 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 347 SQ:AASEQ MSSFFFSTPVDIDIVLEDADERETVDIKLDKNRREKAPLYMDGESVKGAVTVRPKDGKRLEHTGIKVQFIGTIEMFFDRGNHYEFLSLVQELAAPGELQHPRTFTFNFKNVEKQYESYNGINVKLRYFIRVTVSRRIADIVREKDIWVYSYKMPPDNNSPIKMDVGIEDCLHIEFEYSKSKYHLKDVIVGRIYFLLVRLKIKHMELSIIRRETTGSPPNQYNESETLVRFEIMDGSPSRGETIPIRLFLGGFDLTPTFRDVNKKYSTRYYLSLVLIDEDARRYFKQSEITLYRQPPELPPVPGAAALPPQQPMPPHTQKEGGDAEALDSEPEPNPAAHEQQQVPAAA BL:SWS:NREP 1 BL:SWS:REP 4->293|VPS26_SCHPO|e-114|62.4|290/298| SEG 294->315|qppelppvpgaaalppqqpmpp| BL:PDB:NREP 1 BL:PDB:REP 10->293|2r51A|7e-98|62.0|279/283| RP:PDB:NREP 1 RP:PDB:REP 15->269|1cf1B|5e-30|13.7|248/360| RP:PFM:NREP 1 RP:PFM:REP 18->279|PF03643|e-106|69.8|262/265|Vps26| HM:PFM:NREP 1 HM:PFM:REP 6->279|PF03643|1.7e-131|61.3|274/275|Vps26| GO:PFM:NREP 2 GO:PFM GO:0007034|"GO:vacuolar transport"|PF03643|IPR005377| GO:PFM GO:0030904|"GO:retromer complex"|PF03643|IPR005377| OP:NHOMO 331 OP:NHOMOORG 193 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1111112-31111111111111111111111111111111111111111111111111111111111112111111111111111111-121111112111-1221-12133436422222222531324G3-3272322422321222232331333312122111122112311111F11111322412311-1112 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 288 STR:RPRED 83.0 SQ:SECSTR #####TTTTEEEEEEEEEEcTTccEEEEEccEEcEEEEETTEEccEEEEEEEcHHHTccHTTcEEEEEEEEEEEEEEEEEEEEccccccccccHHcTTEEEEEEcccccccccccTTcccccEEEEEEEEEEEEEEEETTEEEEccGGGEEEEEEEEEEEccccccccccEEEEEEEcccEEETTccEEEEEEEEcccccEEEEEEEEEEEEEEccccccEEEEEEEEEEEEcccccccEEEEEEEEEcccGGGccccTTccccccTTcEEEEEEEEcccTTccccEEEEEEc###################################################### PSIPRED ccccccccEEEEEEEEcccccEEEEEEEcccccEEEEEEEEcccEEEEEEEEEEccccEEEEEEEEEEEEEEEEEEcccccccEEEEEEEEEccccccccccEEEEEcccccccccEEEEEEEEEEEEEEEEEEccccccEEEEEEEEEEcccccccccccEEEEcHHHcEEEEEEEccccEEccccEEEEEEEEEEEccccEEEEEEEEEEEEcccccEEEEcEEEEEEEEEccccccccEEEEEEEccccccccccHHHcccEEEEEEEEEEEEcccccEEEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccHHHcccccc //