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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_01766
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  97/199 : Viruses  0/175   --->[See Alignment]
d.20.1
:230 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->124 2ebmA PDBj 2e-12 38.7 %
:RPS:PDB   6->116 2dayA PDBj 3e-08 26.0 %
:RPS:SCOP  5->116 1ukxA  d.20.1.3 * 1e-16 23.8 %
:HMM:SCOP  3->129 1ukxA_ d.20.1.3 * 2.3e-21 38.8 %
:RPS:PFM   5->116 PF05773 * RWD 6e-10 41.9 %
:HMM:PFM   4->116 PF05773 * RWD 3.8e-26 41.9 105/115  
:HMM:PFM   126->198 PF09468 * RNase_H2-Ydr279 0.00044 25.4 67/306  
:BLT:SWISS 7->165 YCF9_SCHPO 6e-18 34.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_01769 GT:GENE CIRG_01766 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 230 SQ:AASEQ MGRADQEEERETLKSIFPDEITDISEHTYRISIVLDVSHHGEDYSDPPVLILQVTYPEDYPDVAPHLEISAPPNAPKYPHLDIQEDRDRLLESLQTTIEENLGMQMIFTLVDMLKEGAELLISERREAIQALKEFEAAKAEEEENRKFQGEAVTRESFLAWRENFQKEIEEEEKRKQEEPEAEEKKKKGATKEPKKLTGKQLWERGLAGKADYDEEDPLPAKLASVDLKA BL:SWS:NREP 1 BL:SWS:REP 7->165|YCF9_SCHPO|6e-18|34.6|153/215| SEG 131->144|alkefeaakaeeee| SEG 167->196|keieeeekrkqeepeaeekkkkgatkepkk| BL:PDB:NREP 1 BL:PDB:REP 5->124|2ebmA|2e-12|38.7|111/128| RP:PDB:NREP 1 RP:PDB:REP 6->116|2dayA|3e-08|26.0|104/128| RP:PFM:NREP 1 RP:PFM:REP 5->116|PF05773|6e-10|41.9|105/112|RWD| HM:PFM:NREP 2 HM:PFM:REP 4->116|PF05773|3.8e-26|41.9|105/115|RWD| HM:PFM:REP 126->198|PF09468|0.00044|25.4|67/306|RNase_H2-Ydr279| RP:SCP:NREP 1 RP:SCP:REP 5->116|1ukxA|1e-16|23.8|105/137|d.20.1.3| HM:SCP:REP 3->129|1ukxA_|2.3e-21|38.8|116/137|d.20.1.3|1/1|UBC-like| OP:NHOMO 107 OP:NHOMOORG 97 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----2----------11111111111111111111111111111111111111111111111------------------------11--111-1----1----1-----23111111-1--111--1-121-1131-1-1--21-1---1-11-1111----111-211---1-----------1---1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 120 STR:RPRED 52.2 SQ:SECSTR ####HHHHHHHHHHHHcTTTEEEETTccccEEEEEEEcccccccccccEEEEEEEEcccTTccccEEEEcccEEEEEEEEcccHHHHHHHHHHHHHHHHHTTTcccHHHHHHHHHHHHHHHHHH########################################################################################################## DISOP:02AL 230-231| PSIPRED ccHHHHHHHHHHHHHHccccEEEccccccEEEEEEEccccccccccccEEEEEEEEcccccccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccHHHHHHccccccccccccccHHHHHHHccccc //