[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_02118
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  156/915 : Eukaryota  51/199 : Viruses  0/175   --->[See Alignment]
b.45.1
:261 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   14->231 2ol5B PDBj 7e-12 34.6 %
:RPS:PDB   7->91 2c9zA PDBj 4e-04 15.3 %
:RPS:SCOP  15->229 1rfeA  b.45.1.1 * 1e-07 13.8 %
:HMM:SCOP  7->261 2furA1 b.45.1.1 * 1.3e-27 32.6 %
:RPS:PFM   1->211 PF04299 * FMN_bind_2 4e-36 50.9 %
:HMM:PFM   1->211 PF04299 * FMN_bind_2 6.1e-56 52.7 169/169  
:BLT:SWISS 1->258 Y0679_EMENI e-105 71.3 %

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_02121 GT:GENE CIRG_02118 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 261 SQ:AASEQ MHLRAVHAEENIAVLQQLVRENPLGILTTAIQSPLHPLIQSSHIPFVIDVPETEDGGSPSNGTLRGHIARQNPQAKVLMEALAARKEQGHDGLELPDEVLVLFNGAHHHYVTPKFYTETKPVSGKVVPTWNYSAVQAYGKIKVFCDSKAEETNAFLQRQVEDLTRLTESSIMGYTGEGGRPAAWEVADAPTPYVEILRKGIIGIEIKVDRLQGKFKMSQEMSKGDREGVVRGFDALGTEAGKGMAQTVRERGELKDRQRES BL:SWS:NREP 1 BL:SWS:REP 1->258|Y0679_EMENI|e-105|71.3|251/251| BL:PDB:NREP 1 BL:PDB:REP 14->231|2ol5B|7e-12|34.6|159/179| RP:PDB:NREP 1 RP:PDB:REP 7->91|2c9zA|4e-04|15.3|85/438| RP:PFM:NREP 1 RP:PFM:REP 1->211|PF04299|4e-36|50.9|169/169|FMN_bind_2| HM:PFM:NREP 1 HM:PFM:REP 1->211|PF04299|6.1e-56|52.7|169/169|FMN_bind_2| RP:SCP:NREP 1 RP:SCP:REP 15->229|1rfeA|1e-07|13.8|145/160|b.45.1.1| HM:SCP:REP 7->261|2furA1|1.3e-27|32.6|193/0|b.45.1.1|1/1|FMN-binding split barrel| OP:NHOMO 246 OP:NHOMOORG 207 OP:PATTERN -------------------------------------------------------------------- 12------------1----------1---------------1-1--------111----------------------------------------------1---11-------------------------------------1----------------------------------------1-----1-122222-12-221212-111-1-21-2----1------1---------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------1--1-1-2--1--1-----1----1-1-111-11-----------1------------------------------------------122211111111111111111111111111-11111112111111-11-1-1--1-1------------111----------------------------1---------------------------23-1--11111--11111-1-111-------1--------------------------------------------------------1-----------------1-------------------------------------11---------------11111-1-----1111111111111-111-------------------------1--------1-------11----------------------------------------------------- -------------------11113332---------1111111---211323221211----112-1111--1-11----111111---1------111---1------2---------------------------------------------------------------1----------------------1-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 202 STR:RPRED 77.4 SQ:SECSTR ######cHHHHHHHHHHHHHHcTTcEEEEEEcHHHHHHHTccccTTEccccTTccccccTTHHHHHHHHHHHHHHHHHHHHHHHHHccccc#####ccEEEEEEEEEE#EEcTTccc#####TTccccEEEEEEEEEEEEEEEccc##########HHHHHHHHHH##HHHHHHccTTccccccccHHHTTccccccHTTEEEEEEEEEEEEEEEEccTTccHHHHHHHHH############################## DISOP:02AL 260-262| PSIPRED ccccHHHccccHHHHHHHHHHcccEEEEEEcccccccccccccccEEEEccccccccccccEEEEEEEEccccHHHHHHHcccccccccccccccccEEEEEEEcccccccccccccccccccccccccccHHEEEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHccHHHHHHHHHcccEEEEEEEEEEEEEEEcccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcc //