[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_02120
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  57/68 : Bacteria  653/915 : Eukaryota  89/199 : Viruses  0/175   --->[See Alignment]
c.67.1
:302 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   21->177 1vefA PDBj 1e-15 39.7 %
:RPS:PDB   23->297 3du4A PDBj 4e-22 20.3 %
:RPS:SCOP  4->180 1d7rA  c.67.1.4 * 6e-22 24.3 %
:HMM:SCOP  13->183 1zodA1 c.67.1.4 * 9.3e-38 38.3 %
:HMM:SCOP  229->294 2gsaA_ c.67.1.4 * 0.00036 18.2 %
:RPS:PFM   36->177 PF00202 * Aminotran_3 1e-17 38.4 %
:HMM:PFM   24->178 PF00202 * Aminotran_3 1.3e-33 36.2 149/339  
:BLT:SWISS 14->171 YC7B_SCHPO 1e-24 45.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_02123 GT:GENE CIRG_02120 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 302 SQ:AASEQ MYLTSRPTYPTTCVIAPWNNPAETAELLATRPRGSIAAILVEPLQGAGGCRPASAHFLKTLRALADQKSALLIVDEVMTSRLATRGLAQEWALRPDLITLGKWIGGGMSFGAFGGRRDVLQLFDPRTTKVPLGHAGTFNNNVLSMAAGCAGLDVYSGQRVARLNELGSTLKARLHALLADASLCEPPANRTDNDNDDDDDDAQRYPLETDSNSDTNDVPPTPPPGRMYVSGYGSVLSIRFSGPDATTCHQLFFHHMLEEKIYLAARGYMALSLELSRADIEHFIAAVQRFVTKYAALLLKDG BL:SWS:NREP 1 BL:SWS:REP 14->171|YC7B_SCHPO|1e-24|45.2|155/435| SEG 105->115|gggmsfgafgg| SEG 192->201|dndndddddd| BL:PDB:NREP 1 BL:PDB:REP 21->177|1vefA|1e-15|39.7|151/387| RP:PDB:NREP 1 RP:PDB:REP 23->297|3du4A|4e-22|20.3|232/447| RP:PFM:NREP 1 RP:PFM:REP 36->177|PF00202|1e-17|38.4|138/336|Aminotran_3| HM:PFM:NREP 1 HM:PFM:REP 24->178|PF00202|1.3e-33|36.2|149/339|Aminotran_3| GO:PFM:NREP 2 GO:PFM GO:0008483|"GO:transaminase activity"|PF00202|IPR005814| GO:PFM GO:0030170|"GO:pyridoxal phosphate binding"|PF00202|IPR005814| RP:SCP:NREP 1 RP:SCP:REP 4->180|1d7rA|6e-22|24.3|173/431|c.67.1.4| HM:SCP:REP 13->183|1zodA1|9.3e-38|38.3|167/0|c.67.1.4|1/2|PLP-dependent transferases| HM:SCP:REP 229->294|2gsaA_|0.00036|18.2|66/0|c.67.1.4|2/2|PLP-dependent transferases| OP:NHOMO 1531 OP:NHOMOORG 799 OP:PATTERN 44-1-31133333331-322222121121211112111222221111-211111111-1--1--1--1 231-----11--1-11211-12--1211111131111-13---2-21------1-1----312--11313---------112211122-----------1111111-211--------------11111-11111132231---342233222112211111122332221111111111121413221--31122222222322222222333222433443112111221123333333333333321121-------------11---------------------------------------------1---------1-121-------1-12-111111312--111-1221221211211111--211122--11-1212333231241111111111113-1111111122-14222324233241321-121--11124333333332221-213--1----------------------------12213--123111143333244443444232352234223341321121314212-1112232222222111-2212122121121111-1212124231111122111111-----11111111111111211313121411121112111211132123332--11211------23222334333433344-3444333433333444443323332323233233233323233422133432-122222222222--111111122221122222231211111122222112121-21233335435146563376211111111221121222223222333232222211111-1-2211------------------------------------------1-2---111 --------------111312121434222222211-122222221111222223121122221--1-1-----1--1--1----------1-112-2--11-1111-11-1----------------------------------------------------1----------11321K12-225124234121---1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 298 STR:RPRED 98.7 SQ:SECSTR EEEEEHHHHTccccEEETTEEcHHHHHHHHHGGGEEEEEEEccEEcTTTcEEccTTHHHHHHHHHHHTTcEEEEEcTTTTTTccccGGGGGTccccEEEEcGGGGTTccccEEEEEEHHGGGcccTTcccccccccTTTTcHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTccTEEEEEEEETTEEEHccEETTccEEEEccTTEEEEEETccTTTTEEEEEEETTEEEEEEcccTTTcHHHHHHHHHHHTTEEccEETEEcccTTccHHHHHHHHHHHHHHHHHHHTTc#### DISOP:02AL 302-303| PSIPRED ccccccccccccEEEEEcccHHHHHHHHHHcccccEEEEEEcccccccccEEccHHHHHHHHHHHHHHccEEEEccccccccccccHHHHHcccccEEEEEEHHHccccEEEEEEcHHHHHHHccccccccEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEccccEEEEEEEEcccccccccHHHHHHHHccccccccccEEEEEcccccccHHHccccHHHHHHHHHHHHHHccEEEcccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHccc //