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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_02142
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  8/915 : Eukaryota  101/199 : Viruses  0/175   --->[See Alignment]
:305 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   105->241 3i2tA PDBj 2e-07 34.1 %
:RPS:PDB   31->272 3cu7A PDBj 3e-08 5.2 %
:RPS:PFM   143->229 PF04885 * Stig1 2e-05 51.4 %
:HMM:PFM   54->101 PF04885 * Stig1 9.5e-07 29.8 47/137  
:HMM:PFM   99->145 PF04885 * Stig1 1e-10 38.3 47/137  
:HMM:PFM   142->187 PF04885 * Stig1 1.5e-07 39.1 46/137  
:HMM:PFM   184->230 PF04885 * Stig1 2.5e-08 40.4 47/137  
:HMM:PFM   227->272 PF04885 * Stig1 1e-06 41.3 46/137  
:BLT:SWISS 46->304 MEGF6_MOUSE 1e-16 43.3 %
:TM
:REPEAT 6|84->97|127->140|170->182|212->225|255->267|293->305
:REPEAT 5|54->83|98->126|141->169|183->211|226->254

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_02145 GT:GENE CIRG_02142 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 305 SQ:AASEQ MVKLLIVSLLALCASAVPQEQDPGNRICAQWCADNFDNPGRICTAPAAQGRGPCYTCGPFKESESQELCDERCRDTDTHPQHCGRCDTPCSQGSSCVGGVCQPACPAGRSTCPSGCKDLNSDPQHCGRCDTPCSQGSSCVGGMCRAACPPGQSTCPAGCKDLNTDEQNCGACGTVCAQGSCVGGVCQPLCPPGQSPCPTGCKNLDSDPQNCGICGNVCPQGSSCVGGSCQPACPAGQSRCPTGCKDLNSDSQNCGACGNVCTHGVCRAGQCSRKHCPGSKLSLLHILRLSDGGDCDTPCENDNCI BL:SWS:NREP 1 BL:SWS:REP 46->304|MEGF6_MOUSE|1e-16|43.3|210/1572| TM:NTM 1 TM:REGION 1->18| NREPEAT 2 REPEAT 6|84->97|127->140|170->182|212->225|255->267|293->305| REPEAT 5|54->83|98->126|141->169|183->211|226->254| BL:PDB:NREP 1 BL:PDB:REP 105->241|3i2tA|2e-07|34.1|123/542| RP:PDB:NREP 1 RP:PDB:REP 31->272|3cu7A|3e-08|5.2|231/1625| RP:PFM:NREP 1 RP:PFM:REP 143->229|PF04885|2e-05|51.4|72/90|Stig1| HM:PFM:NREP 5 HM:PFM:REP 54->101|PF04885|9.5e-07|29.8|47/137|Stig1| HM:PFM:REP 99->145|PF04885|1e-10|38.3|47/137|Stig1| HM:PFM:REP 142->187|PF04885|1.5e-07|39.1|46/137|Stig1| HM:PFM:REP 184->230|PF04885|2.5e-08|40.4|47/137|Stig1| HM:PFM:REP 227->272|PF04885|1e-06|41.3|46/137|Stig1| OP:NHOMO 742 OP:NHOMOORG 109 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------3------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------34135I-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----2-5-21----------1-1-1--------221---1111-------132234-2------------2------------------1----------1------3-3XAG6E675133582LE3H5d*B3I6M2532L55AA2B23-52-L6C54F69O14723G23C54A3-1------119123-11---111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 304 STR:RPRED 99.7 SQ:SECSTR cHHHHHHHHHHHHTTTcEEEEEEEccccccHHHccTTcccccccEETTEEEEEEccccccccEEEEEEEEccccccccccEEEEEEETTEEEEEEEEEEccccccccccccTTcHHHHcccccccccccccccccTTTHHHHcTTccEEEEEEEEEccccccccEEEEEEEEEEEccTTcccTTccEEEEccTTccccEEcTTcccccccccEEEEccccccccccccccccccccccccccccccEEccccccccccHHHHTTHHHHHHTTTcccccHHccccTTccccEEETTEEEcccTTT# PSIPRED ccEEEEEEHHHHccccccEEccccccEEEccccccccccccccccccccccccEEEcccccccccEEEcccccccccccccccccccccccccccEEccEEccccccEEEEccccccccccccccccccccccccccEEEccccccccccccEEcccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccEEEccEEEEEEcccccccccccccccccccccccccccccc //