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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_02174
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  164/199 : Viruses  0/175   --->[See Alignment]
d.3.1
:321 amino acids
:SECSTR
:PSIPRED
:RPS:PDB   154->317 3by4A PDBj 2e-21 27.9 %
:RPS:SCOP  170->276 1tffA  d.3.1.11 * 4e-04 25.2 %
:HMM:SCOP  129->322 1tffA_ d.3.1.11 * 4.2e-24 28.7 %
:RPS:PFM   173->314 PF02338 * OTU 5e-13 42.0 %
:HMM:PFM   174->314 PF02338 * OTU 5.6e-19 28.0 118/125  
:HMM:PFM   5->85 PF08597 * eIF3_subunit 9.8e-05 23.9 67/245  
:BLT:SWISS 2->317 OTU6B_DANRE 8e-24 35.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_02177 GT:GENE CIRG_02174 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 321 SQ:AASEQ MEELQAKHRKEQRDLQSRITQKKKSATKKTRKGVNDECERWQRELLERQQTEIAELNGDLNAPIEHFDNLHITDNYQAPVTANGPTDADASNAPPVQSTPTPSTAAPLDGPSQQPTKKPNRQKARLARRAAEREAEAEAAAAEAANQTDHRSNEKQAMQAVFDRLGLKERDIAPDGHCLYSAVAVQLAEVGVDLSLDERTPAAKSTGEKQGSTRNDGYKTVRATTGKFVLANADDFAPFIDEPLEEYARKIMFTAEWGGQLELQAMARAYGVEINVIQGDGRNEKFEPGDDKGGERKKIWLAYYRHSYGLGEHYNALSRVA BL:SWS:NREP 1 BL:SWS:REP 2->317|OTU6B_DANRE|8e-24|35.0|263/293| SEG 20->32|tqkkksatkktrk| SEG 124->145|arlarraaereaeaeaaaaeaa| RP:PDB:NREP 1 RP:PDB:REP 154->317|3by4A|2e-21|27.9|129/172| RP:PFM:NREP 1 RP:PFM:REP 173->314|PF02338|5e-13|42.0|112/114|OTU| HM:PFM:NREP 2 HM:PFM:REP 174->314|PF02338|5.6e-19|28.0|118/125|OTU| HM:PFM:REP 5->85|PF08597|9.8e-05|23.9|67/245|eIF3_subunit| RP:SCP:NREP 1 RP:SCP:REP 170->276|1tffA|4e-04|25.2|107/221|d.3.1.11| HM:SCP:REP 129->322|1tffA_|4.2e-24|28.7|181/228|d.3.1.11|1/1|Cysteine proteinases| OP:NHOMO 203 OP:NHOMOORG 164 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----12------22111111111111111111111111-1111111111-1111111-111111111111111111111111111111-1111111-111--111--2111121111121111232-31372-1211--22-15212-112-13111-111211111-11-1111-11-12111-1111123--1111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 139 STR:RPRED 43.3 SQ:SECSTR ######################################################################################################################################################cccTTEEEcTTTcccEEEEEcccccTTHHHHHHHHHHHc#######################HcccccHHHHHHHHHHHHHcTTTTcHHHTccHHHHHHHTTcTTccccHHHHHHHHHHHTcEEEEEETTTEEEEEcTTTccTTccEEEEEEEc#####ccccEEEE#### PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHccHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHccccccccccccHHHHcccccccccHHHHHHHHHHHHHHHHHcHHHHHHHccccHHHHHHHHHcccccccHHHHHHHHHHHcccEEEEEccccEEEcccccccccccccEEEEEEcHHcccccccHHccccc //