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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_02182
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  184/199 : Viruses  0/175   --->[See Alignment]
b.40.4b.84.4d.51.1
:373 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   51->330 2nn6H PDBj 1e-30 40.6 %
:RPS:PDB   51->206 2ba0B PDBj 4e-09 25.4 %
:RPS:SCOP  51->110 2nn6H2  b.84.4.2 * 1e-08 42.6 %
:RPS:SCOP  111->204 2nn6H1  b.40.4.5 * 2e-11 54.3 %
:RPS:SCOP  243->330 2nn6H3  d.51.1.1 * 1e-07 37.3 %
:HMM:SCOP  114->199 1sroA_ b.40.4.5 * 1.2e-05 22.4 %
:HMM:PFM   116->185 PF10447 * EXOSC1 4.8e-06 34.3 70/82  
:HMM:PFM   224->253 PF09460 * Saf-Nte_pilin 0.00094 30.0 30/145  
:BLT:SWISS 51->330 RRP4_SCHPO 5e-57 47.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_02185 GT:GENE CIRG_02182 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 373 SQ:AASEQ MAITILPPVVDDEPYASSEENDDFHNADSDIEMDDATSRPSKRPRLSKNTIVTPGEVVTDDPQWMRGHGTFTPAPPGFSSTAQSSLSSTIIATVAGTVLKTNKLLSVYPLRARYNPEIGDLVVGRIVEVQSRRWKVDVAAPLLANLPLSAINLPGGILRKRTTADELQIRSFFNEGDLVVAEVQSVHQDGSASLHTRSLKYGKLRNGIFLAVAGMGGAGVARGTGVVRSRRQVWTVPGANGGSDIEVILGVNGYIWISKRADVAAEDSGMGMSITRLEDMVSGTMYSSQNDEISLATRREIARLAGCIRVLVQGGIKVDEDTVMKAYATSLELELEAGIEDEDEDEIHRIKREGRDYLGGERAKRVLEAVLQQ BL:SWS:NREP 1 BL:SWS:REP 51->330|RRP4_SCHPO|5e-57|47.4|249/329| SEG 79->93|sstaqsslsstiiat| SEG 139->154|aapllanlplsainlp| SEG 211->231|avagmggagvargtgvvrsrr| SEG 331->346|leleleagiededede| BL:PDB:NREP 1 BL:PDB:REP 51->330|2nn6H|1e-30|40.6|219/250| RP:PDB:NREP 1 RP:PDB:REP 51->206|2ba0B|4e-09|25.4|130/222| HM:PFM:NREP 2 HM:PFM:REP 116->185|PF10447|4.8e-06|34.3|70/82|EXOSC1| HM:PFM:REP 224->253|PF09460|0.00094|30.0|30/145|Saf-Nte_pilin| RP:SCP:NREP 3 RP:SCP:REP 51->110|2nn6H2|1e-08|42.6|47/48|b.84.4.2| RP:SCP:REP 111->204|2nn6H1|2e-11|54.3|81/82|b.40.4.5| RP:SCP:REP 243->330|2nn6H3|1e-07|37.3|67/120|d.51.1.1| HM:SCP:REP 114->199|1sroA_|1.2e-05|22.4|76/0|b.40.4.5|1/1|Nucleic acid-binding proteins| OP:NHOMO 212 OP:NHOMOORG 184 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 11--111-311111111111111111111111111111111111111111-11-1111111111111111111111111111111111-1111111111111111111211121111112111122111691-312-1111-111-11--11111211111111111111211-111113111-11111111-111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 240 STR:RPRED 64.3 SQ:SECSTR ##################################################EEcTTcEEEccGGcGccTTEEEETTEEEEc#####cTTEEEEcccEEEEEccccEEEEEcccccccccccEEEEEEEEccTTEEEEEcccccccccccTTcEEEEEEEEGGGcTTTccHHHHccTTcEEEEEEEEEcTTccEEEEccccccEEEccccEEEccTTcccccTTccccccT########TcE######EEEETTTEEEEEcccccc#####################cGGGcccccHHHHHHHHHHHHHHHHHHHTTccccHHHHHHHHHTH########################################### DISOP:02AL 372-374| PSIPRED ccEEEEccccccccccccccccccHHHHHHHHccccccccccccccccccEEEccEEccccHHHcccccccccccccccccccccccccEEEEEEEEEEEEccEEEEEEcccccccccccEEEEEEEEEEccEEEEEEcccccccEEEEcccccccEEEcccccccHHHHHHcccccEEEEEEEEEcccccEEEEEEcccccEEcccEEEEEcccccccccccccccccEEEEEEcHHccccccEEEEEEcccEEEEccccHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //