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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_02189
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  47/199 : Viruses  0/175   --->[See Alignment]
:682 amino acids
:SECSTR
:PSIPRED
:RPS:PDB   166->332 3c3lB PDBj 5e-04 6.6 %
:RPS:PFM   121->230 PF09405 * Btz 5e-11 39.2 %
:HMM:PFM   128->243 PF09405 * Btz 1.3e-33 40.0 110/130  
:BLT:SWISS 95->266 CASC3_DANRE 4e-05 27.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_02192 GT:GENE CIRG_02189 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 682 SQ:AASEQ MAPHHRRRLPASRRRIEDEGEEDGSVAGDFEDDSLSEASSHQDEDPEGEGSDFSDNDFPASPESRKDERVESRTQKEANCSSPTKTPFAAKVSETEAMLNGMKLADDTAGVAEIHFDDMASEHDASPDLSDKATRLPQSQRRRREQTENGKERGANPAFVPTRGGFFLHDKRSSNSPNGYRTANNKLKSKPHGLIVDSNVRRPPPKPDITDGPWTHDLHESVNEGPPPASSRPSSTLPSNMPSGQSSKPVPTAPRSTPPNRSFSSTVLIGNVPVVVFLPGMANPIPYSAVPKKQHTRLPQHRPPLRRDKPVRIALPGSPPRYIFPSTERSFIFIPRALRPNQQAYRGRGRGGFYSSRRSSLYGGTVYTPSLPMSRRSSVGRVASRNGMISPGGSVMSRPPIMAGEAGKPVVRLPPVGRGPLPAGPMAPPPAPPSVASAAGAVPQPLAQPSPYTPQHPQFRENRPTPTIPMHQPRPQKTVSVADIESPMSLYNPPQQLEQPFHHQVPMALNGPPYGPETAGYSSHTRNVSHPPQASATPLSQIPERAIHAPPFQPYPYQQPQNYYPSASYPSGPVGYPGPNPDYPQYSAPVPPGPTPVFVPAGQQAPYGMPSQPTTEQFTQSGTVAHESNGTVYYYDASQYPNYPNATYPVAPQGGVVGMGGMITPPGTYYYPQQPNGTVYYS BL:SWS:NREP 1 BL:SWS:REP 95->266|CASC3_DANRE|4e-05|27.2|169/100| SEG 2->15|aphhrrrlpasrrr| SEG 17->24|edegeedg| SEG 345->364|yrgrgrggfyssrrsslygg| SEG 374->385|srrssvgrvasr| SEG 409->445|pvvrlppvgrgplpagpmapppappsvasaagavpqp| SEG 550->581|ppfqpypyqqpqnyypsasypsgpvgypgpnp| SEG 589->600|pvppgptpvfvp| SEG 664->675|tppgtyyypqqp| RP:PDB:NREP 1 RP:PDB:REP 166->332|3c3lB|5e-04|6.6|167/1085| RP:PFM:NREP 1 RP:PFM:REP 121->230|PF09405|5e-11|39.2|102/122|Btz| HM:PFM:NREP 1 HM:PFM:REP 128->243|PF09405|1.3e-33|40.0|110/130|Btz| OP:NHOMO 47 OP:NHOMOORG 47 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------1-111111111111111111111111111111111111111111111-------------------------------------------------------------------------------------------------------------------------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 167 STR:RPRED 24.5 SQ:SECSTR #####################################################################################################################################################################EEGGGTcTTcEEEEEEEccccTTcGGGGcTTHHHHHHccccccccEETTcccccccEETTEEEEEccHHHHHHHHHHHHcccEEcHHHHHHHHHHcHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccGGGccEEccEEEcTTccE############################################################################################################################################################################################################################################################################################################################################################## PSIPRED cccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccHHHHccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccHHccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcc //