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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_02192
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  118/199 : Viruses  0/175   --->[See Alignment]
d.15.2g.44.1g.49.1g.85.1
:817 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   194->229 1totA PDBj 7e-05 45.5 %
:BLT:PDB   371->420 2fc7A PDBj 4e-05 44.0 %
:RPS:PDB   7->94 2bkfA PDBj 7e-06 13.1 %
:RPS:PDB   377->424 2e5rA PDBj 4e-05 18.4 %
:RPS:PDB   432->490 2e5rA PDBj 8e-06 28.3 %
:RPS:SCOP  8->95 2bkfA1  d.15.2.2 * 3e-07 13.1 %
:RPS:SCOP  194->230 1totA1  g.44.1.6 * 2e-05 37.8 %
:RPS:SCOP  304->344 1x4sA1  g.85.1.2 * 8e-05 14.6 %
:RPS:SCOP  363->423 2dipA1  g.44.1.6 * 1e-06 20.3 %
:RPS:SCOP  454->490 1totA1  g.44.1.6 * 1e-05 27.0 %
:HMM:SCOP  201->346 1v5nA_ g.49.1.3 * 0.00018 25.6 %
:RPS:PFM   373->411 PF00569 * ZZ 5e-07 51.3 %
:RPS:PFM   434->483 PF00569 * ZZ 5e-06 46.0 %
:RPS:PFM   746->817 PF05470 * eIF-3c_N 5e-04 32.4 %
:HMM:PFM   196->230 PF00569 * ZZ 6.8e-09 45.5 33/46  
:HMM:PFM   304->341 PF00569 * ZZ 4.4e-06 34.2 38/46  
:HMM:PFM   372->406 PF00569 * ZZ 1.5e-09 37.1 35/46  
:HMM:PFM   452->474 PF00569 * ZZ 8.3e-07 43.5 23/46  
:BLT:SWISS 195->227 YN8B_SCHPO 7e-05 42.4 %
:BLT:SWISS 305->346 ADA2_SCHPO 2e-05 38.1 %
:BLT:SWISS 367->403 SQSTM_MOUSE 8e-06 43.2 %
:BLT:SWISS 377->493 ZZEF1_HUMAN 9e-08 38.8 %
:BLT:SWISS 577->697 CF106_HUMAN 4e-13 35.2 %
:PROS 785->797|PS00018|EF_HAND_1
:REPEAT 2|341->403|411->471
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_02195 GT:GENE CIRG_02192 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 817 SQ:AASEQ MNRSVGPDTLIAIKANYEGTNRRFKLPLKDLEAYTFPRKIREVLSLSVDSNIVIERYSDSAARWVTLNSSDTAIYKQLYRAAKAKTKLRIKITESKQKPECVPEPELQPAHANESTIPSTVHSARGSYLNTVLNDPLPITDSDHGASFKERNHPPAIKAAEDIEKPTRESEDAWKTDREGRLHFNNRTNVAATFYIDCNHCGNSIPNAHWHCSICEDGDYDLCQRCIDSGLLCPGEDHWLIKRSVIDGLVVNSTTETIAPKSQEQVTKEFAEEVEEPGLATVEEEAELEAPDAPEPEPTVEMRTCNSCFQDFEEAQLVTCFDCHDYDLCFSCIINDVHGHHPGHSFFFTHDVGTSSLKDTVGHLCDPGRGVRHMALCDGCDKRIRGVRHKCLDCPDFDFCGECVHAAPATHPGHRFVPLYEPIPAAIDSYEVHHGVYCDGPLCQGKGDNLYITGDRYKCAICHDTDFCSRCEAHPDNTHNRTHPLLKFKTAVRHVSISTMGENDRGQPLQRMGDRPNTKTSFTEPMAVGVSHAATQVQKTSDLPAPRSPSPPLPTLKGEKVSSPGDLASSGQLQAQFMRDTYPDGFELPRDTVFTKTWTLQNSGAAPWPEGCSVRFAGGDTMFNIDSDHPTSTSELISAMESNKITKPVAPGDSADFRLTLKTPLREGRAISYWRLKTPDGAPFGDRLWCDVAVVSGSKYITIEESDKPENGSGTESAHCEDVMSFEDKAEEPLAASDMVFPKLERESPEMSISDTKTTSSATCWDGREDEHDLADDVESLTMDDADTDGFLTDEEYDILDASDQEFPVGTQKHEQK BL:SWS:NREP 5 BL:SWS:REP 195->227|YN8B_SCHPO|7e-05|42.4|31/397| BL:SWS:REP 305->346|ADA2_SCHPO|2e-05|38.1|42/437| BL:SWS:REP 367->403|SQSTM_MOUSE|8e-06|43.2|37/442| BL:SWS:REP 377->493|ZZEF1_HUMAN|9e-08|38.8|98/2961| BL:SWS:REP 577->697|CF106_HUMAN|4e-13|35.2|105/298| PROS 785->797|PS00018|EF_HAND_1|PDOC00018| NREPEAT 1 REPEAT 2|341->403|411->471| SEG 279->301|latveeeaeleapdapepeptve| SEG 541->556|sdlpaprspspplptl| BL:PDB:NREP 2 BL:PDB:REP 194->229|1totA|7e-05|45.5|33/52| BL:PDB:REP 371->420|2fc7A|4e-05|44.0|50/82| RP:PDB:NREP 3 RP:PDB:REP 7->94|2bkfA|7e-06|13.1|84/86| RP:PDB:REP 377->424|2e5rA|4e-05|18.4|47/63| RP:PDB:REP 432->490|2e5rA|8e-06|28.3|53/63| RP:PFM:NREP 3 RP:PFM:REP 373->411|PF00569|5e-07|51.3|39/45|ZZ| RP:PFM:REP 434->483|PF00569|5e-06|46.0|44/45|ZZ| RP:PFM:REP 746->817|PF05470|5e-04|32.4|71/577|eIF-3c_N| HM:PFM:NREP 4 HM:PFM:REP 196->230|PF00569|6.8e-09|45.5|33/46|ZZ| HM:PFM:REP 304->341|PF00569|4.4e-06|34.2|38/46|ZZ| HM:PFM:REP 372->406|PF00569|1.5e-09|37.1|35/46|ZZ| HM:PFM:REP 452->474|PF00569|8.3e-07|43.5|23/46|ZZ| GO:PFM:NREP 5 GO:PFM GO:0008270|"GO:zinc ion binding"|PF00569|IPR000433| GO:PFM GO:0008270|"GO:zinc ion binding"|PF00569|IPR000433| GO:PFM GO:0003743|"GO:translation initiation factor activity"|PF05470|IPR008905| GO:PFM GO:0005852|"GO:eukaryotic translation initiation factor 3 complex"|PF05470|IPR008905| GO:PFM GO:0006413|"GO:translational initiation"|PF05470|IPR008905| RP:SCP:NREP 5 RP:SCP:REP 8->95|2bkfA1|3e-07|13.1|84/85|d.15.2.2| RP:SCP:REP 194->230|1totA1|2e-05|37.8|34/52|g.44.1.6| RP:SCP:REP 304->344|1x4sA1|8e-05|14.6|41/46|g.85.1.2| RP:SCP:REP 363->423|2dipA1|1e-06|20.3|59/85|g.44.1.6| RP:SCP:REP 454->490|1totA1|1e-05|27.0|33/52|g.44.1.6| HM:SCP:REP 201->346|1v5nA_|0.00018|25.6|86/0|g.49.1.3|1/2|Cysteine-rich domain| OP:NHOMO 160 OP:NHOMOORG 118 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----11--------1112212221-1122112211211111111111111111111111111---1---------------------1-3221221111112-111---1122223211--11-31-1-241-112-1--1-122111--11-1-111---1-112-------1-----------1241111--2221- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 224 STR:RPRED 27.4 SQ:SECSTR ######ccccEEEEEEETTEEEEEEEc#cGGGccHHHHHHHHHHHHTccc##EEEEEEcTTccEEEE#ccHHHHHHHHHHHHHTTTEEEEEEEE###################################################################################################ccEEETTTTEEE#ccEEEEcccc##ccEEcHHHHHH#############################################################################################################################################cEEccccccccccccccEEEEccccccEEcHHHcHHHccccccccTTccEEEEc#######ccccccccc##cc####cccccccEEEEccccccEEcHHHHHHccccccTTccEEEEcc####################################################################################################################################################################################################################################################################################################################################### DISOP:02AL 817-818| PSIPRED cccccccccEEEEEEEEccccEEEEccccccccccHHHHHHHHHccccccEEEEEEEccccccEEEEcccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccccccccccccccccEEEHHHcccccccccEEccccccccccccHHHHHHHcccccccccEEEEEEccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccEEccccHHHcccccccEEEEEccccHHHHHHHccccccccccccEEEcccccccccHHHHHHHcccccccEEEEEEcccccccEEEEEEEccccccHHHHHHHHccccccccccEEccccccccccccccEEEEEEEcccEEccccccEEEEEccEEEcccccccccHHHHHccccccccccEEEEEEccccccccccccccccccccHHcccccccEEEEccccccccccccccccccccEEEcccccccccccccccccccccccccccccEEEEEEcccccEEEcccccEEEEEEEEEccccccccccEEEEEccccccccccccccccccccccccccccccccccccEEEEEEEEEEccccccEEEEEEEEcccccccccEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccEEEEcccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccHHccc //