[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_02195
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  54/199 : Viruses  0/175   --->[See Alignment]
a.160.1d.218.1
:556 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   153->405 3c66B PDBj 3e-10 12.1 %
:RPS:SCOP  199->248 1no5A  d.218.1.5 * 1e-04 26.0 %
:HMM:SCOP  173->306 2b4vA2 d.218.1.10 * 4.1e-05 25.8 %
:HMM:SCOP  332->499 2b4vA1 a.160.1.4 * 1.2e-15 26.0 %
:HMM:PFM   385->457 PF03828 * PAP_assoc 1.2e-05 22.2 54/61  
:HMM:PFM   224->254 PF01909 * NTP_transf_2 0.0002 35.5 31/93  
:BLT:SWISS 193->494 POLS_MOUSE 8e-13 27.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_02198 GT:GENE CIRG_02195 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 556 SQ:AASEQ MSSLRPIVPHHLLQAECFYHSSLAQSARPVFHHNRRFHASPTRGRLGDLPIVAGNLTETLEAHRYANRQRLIRWIPCKPTGDRNAVAIGPAPSVRRVPRPRQSLPATGRSVQESSELGLELLHPSSKKLRPDIRPHAAISLFRKLMKKSSARVSRKEWSSSDAQYPWLDYLESSKDDGLSRLDDEINAFENYMSHIPQEQAAVNKVITEVEEILLQEDHPQPLVIGSRRTGLAMRHSNIDLLVMLSDPDGLFKYRGPSPTRPKIAELQLERQEQISRLLRGAAKFSSVILVRSRIPKVIATHAATGLPVTIHCGTQLPTSLEFTQSYYSEFPTLRPLLATIRMILEQRNLFGPQNRGISTYGLTMMIIAALKLSEGKYSRTSTAEQLLHVLRFYSTVDFHRYGISVDPPSIFRKCRHLRESSKLVESEAPYIRGQISIGKRSAKLAYHILCLQDPANYMNDLGMEAFRTFEIQEVFGDVYADLRAAVKAWDREWNDSLDEIASEKVNREPSVELITAKAIRDSDDKKAVSMLQFALGGDYERLERIRDKVILGAGS BL:SWS:NREP 1 BL:SWS:REP 193->494|POLS_MOUSE|8e-13|27.4|270/542| SEG 90->101|papsvrrvprpr| RP:PDB:NREP 1 RP:PDB:REP 153->405|3c66B|3e-10|12.1|247/529| HM:PFM:NREP 2 HM:PFM:REP 385->457|PF03828|1.2e-05|22.2|54/61|PAP_assoc| HM:PFM:REP 224->254|PF01909|0.0002|35.5|31/93|NTP_transf_2| RP:SCP:NREP 1 RP:SCP:REP 199->248|1no5A|1e-04|26.0|50/100|d.218.1.5| HM:SCP:REP 173->306|2b4vA2|4.1e-05|25.8|120/0|d.218.1.10|1/1|Nucleotidyltransferase| HM:SCP:REP 332->499|2b4vA1|1.2e-15|26.0|150/0|a.160.1.4|1/1|PAP/OAS1 substrate-binding domain| OP:NHOMO 60 OP:NHOMOORG 54 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------11112211-11111111111111111111----------------------------------------------------------------1121-1---1----11-1-131--1-------1-1-----1----21-----1--1--1--------1-------1---11-1------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 343 STR:RPRED 61.7 SQ:SECSTR ########################################################################################################################################################cccccccHHHHHHHHHHHHH##HHTTccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHTccEEEEEHHHHHTcccccccEEEEEEEcTTccHHHHTTHHHHHHHTcccEEEEEEETTccccEEEEEETTEEcccccccTTcccccGGGGTTccHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHTTcccGGGTcccHHHHHHHHHHHHHHTTcHcTTccHHHHHHHHHHHHHHccTTccEEcHHHHHHHHHHHHHHHHcccTTTEEccccccccEEHHHHTccEcccccccccTTTTTTcccTTTTccH#HHHHHHHHHHHHHHHHTTccccGGG########################################################## DISOP:02AL 8-20| PSIPRED cccccccccHHHccHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHcccHHHHHHcccccccccccccccccccccccccccccccccHHHHccccccccccccccccEEcccccccccccccccccccccccccEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccccccccEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEccccEEEEEEEEcccccEEEEEEEccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHcccccccccccHHHcEEEEEEEccccccccccccccccccccccHHccccccccccccccccccccccccccccccEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHcccccHHHHHccccccccccHHHHHccccccccHHHHHHHHHHHccccHHHHHHHHccEEEcccc //